Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC33.16■■■□□ 2.9
SCAF11Q99590 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF11Q99590 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF11Q99590 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC33.16■■■□□ 2.9
SCAF11Q99590 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF11Q99590 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF11Q99590 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC33.15■■■□□ 2.9
SCAF11Q99590 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF11Q99590 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF11Q99590 AC009102.2-201ENST00000606772 1639 ntBASIC33.15■■■□□ 2.9
SCAF11Q99590 BX842568.3-201ENST00000418104 571 ntBASIC33.15■■■□□ 2.9
SCAF11Q99590 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF11Q99590 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF11Q99590 C17orf82-201ENST00000623772 1530 ntBASIC33.14■■■□□ 2.9
SCAF11Q99590 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SCAF11Q99590 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
SCAF11Q99590 ID1-201ENST00000376105 1233 ntBASIC33.14■■■□□ 2.9
SCAF11Q99590 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC33.14■■■□□ 2.9
SCAF11Q99590 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SCAF11Q99590 AC131274.2-201ENST00000580697 1507 ntBASIC33.14■■■□□ 2.9
SCAF11Q99590 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC33.13■■■□□ 2.89
SCAF11Q99590 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SCAF11Q99590 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC33.13■■■□□ 2.89
SCAF11Q99590 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC33.13■■■□□ 2.89
SCAF11Q99590 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
SCAF11Q99590 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF11Q99590 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC33.12■■■□□ 2.89
SCAF11Q99590 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC33.12■■■□□ 2.89
SCAF11Q99590 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF11Q99590 SNX3-202ENST00000349379 890 ntTSL 2 BASIC33.12■■■□□ 2.89
SCAF11Q99590 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF11Q99590 GRAMD4P2-201ENST00000423297 1097 ntBASIC33.12■■■□□ 2.89
SCAF11Q99590 AC006455.2-201ENST00000429931 906 ntBASIC33.12■■■□□ 2.89
SCAF11Q99590 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF11Q99590 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC33.12■■■□□ 2.89
SCAF11Q99590 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC33.12■■■□□ 2.89
SCAF11Q99590 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC33.11■■■□□ 2.89
SCAF11Q99590 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC33.11■■■□□ 2.89
SCAF11Q99590 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
SCAF11Q99590 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SCAF11Q99590 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SCAF11Q99590 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
SCAF11Q99590 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC33.11■■■□□ 2.89
SCAF11Q99590 AC145676.1-201ENST00000514988 2004 ntBASIC33.1■■■□□ 2.89
SCAF11Q99590 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SCAF11Q99590 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SCAF11Q99590 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC33.1■■■□□ 2.89
SCAF11Q99590 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC33.1■■■□□ 2.89
SCAF11Q99590 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SCAF11Q99590 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SCAF11Q99590 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SCAF11Q99590 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC33.08■■■□□ 2.89
SCAF11Q99590 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SCAF11Q99590 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC33.08■■■□□ 2.89
SCAF11Q99590 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC33.08■■■□□ 2.89
SCAF11Q99590 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC33.07■■■□□ 2.89
SCAF11Q99590 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF11Q99590 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF11Q99590 DLX3-202ENST00000512495 834 ntTSL 2 BASIC33.07■■■□□ 2.88
SCAF11Q99590 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC33.07■■■□□ 2.88
SCAF11Q99590 RAB43-208ENST00000615093 783 ntTSL 5 BASIC33.07■■■□□ 2.88
SCAF11Q99590 AC241377.3-202ENST00000626088 1088 ntBASIC33.07■■■□□ 2.88
SCAF11Q99590 AC241585.3-202ENST00000628937 1088 ntBASIC33.07■■■□□ 2.88
SCAF11Q99590 AC245100.8-202ENST00000629247 1058 ntBASIC33.07■■■□□ 2.88
SCAF11Q99590 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
SCAF11Q99590 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC33.06■■■□□ 2.88
SCAF11Q99590 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SCAF11Q99590 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SCAF11Q99590 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SCAF11Q99590 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
SCAF11Q99590 AC027612.3-201ENST00000413684 1047 ntBASIC33.05■■■□□ 2.88
SCAF11Q99590 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC33.05■■■□□ 2.88
SCAF11Q99590 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SCAF11Q99590 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
SCAF11Q99590 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC33.05■■■□□ 2.88
SCAF11Q99590 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
SCAF11Q99590 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC33.05■■■□□ 2.88
SCAF11Q99590 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC33.04■■■□□ 2.88
SCAF11Q99590 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF11Q99590 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
SCAF11Q99590 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC33.04■■■□□ 2.88
SCAF11Q99590 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF11Q99590 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
SCAF11Q99590 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC33.04■■■□□ 2.88
SCAF11Q99590 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF11Q99590 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC33.03■■■□□ 2.88
SCAF11Q99590 AC004911.1-201ENST00000416316 871 ntBASIC33.03■■■□□ 2.88
SCAF11Q99590 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
SCAF11Q99590 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC33.02■■■□□ 2.88
SCAF11Q99590 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF11Q99590 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC33.02■■■□□ 2.88
SCAF11Q99590 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF11Q99590 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC33.02■■■□□ 2.88
SCAF11Q99590 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC33.01■■■□□ 2.88
SCAF11Q99590 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
SCAF11Q99590 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC33.01■■■□□ 2.88
SCAF11Q99590 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
SCAF11Q99590 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC33.01■■■□□ 2.88
SCAF11Q99590 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC33.01■■■□□ 2.87
SCAF11Q99590 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms