Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40CQ96S21 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40CQ96S21 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40CQ96S21 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40CQ96S21 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB40CQ96S21 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB40CQ96S21 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RAB40CQ96S21 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40CQ96S21 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
RAB40CQ96S21 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RAB40CQ96S21 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
RAB40CQ96S21 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40CQ96S21 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RAB40CQ96S21 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB40CQ96S21 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40CQ96S21 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40CQ96S21 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40CQ96S21 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40CQ96S21 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RAB40CQ96S21 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB40CQ96S21 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB40CQ96S21 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40CQ96S21 AC093536.1-201ENST00000569153 554 ntBASIC18.39■□□□□ 0.53
RAB40CQ96S21 AC092296.2-201ENST00000589470 999 ntBASIC18.39■□□□□ 0.53
RAB40CQ96S21 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB40CQ96S21 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB40CQ96S21 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RAB40CQ96S21 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40CQ96S21 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40CQ96S21 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40CQ96S21 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40CQ96S21 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40CQ96S21 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB40CQ96S21 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40CQ96S21 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40CQ96S21 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40CQ96S21 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40CQ96S21 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RAB40CQ96S21 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40CQ96S21 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40CQ96S21 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40CQ96S21 ECEL1P2-201ENST00000461596 1295 ntBASIC18.36■□□□□ 0.53
RAB40CQ96S21 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40CQ96S21 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40CQ96S21 MIR4449-201ENST00000578365 66 ntBASIC18.36■□□□□ 0.53
RAB40CQ96S21 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB40CQ96S21 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40CQ96S21 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms