Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 AC022517.1-201ENST00000592429 346 ntBASIC20.19■□□□□ 0.82
PCNX1Q96RV3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 BX842568.3-201ENST00000418104 571 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L2-201ENST00000561772 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L6-201ENST00000626483 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L1-201ENST00000627662 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L8-201ENST00000629013 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L3-201ENST00000630187 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L7-201ENST00000630678 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 DUX4L5-201ENST00000630834 1275 ntBASIC20.18■□□□□ 0.82
PCNX1Q96RV3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 AL022069.1-201ENST00000568025 1636 ntBASIC20.17■□□□□ 0.82
PCNX1Q96RV3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX1Q96RV3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 RARRES2P11-201ENST00000635158 484 ntBASIC20.16■□□□□ 0.82
PCNX1Q96RV3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 AL031602.1-201ENST00000633169 911 ntBASIC20.16■□□□□ 0.82
PCNX1Q96RV3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.16■□□□□ 0.82
PCNX1Q96RV3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX1Q96RV3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.14■□□□□ 0.82
PCNX1Q96RV3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PCNX1Q96RV3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX1Q96RV3 AC092437.1-201ENST00000624794 1048 ntBASIC20.14■□□□□ 0.81
PCNX1Q96RV3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 AC136469.2-201ENST00000623944 1028 ntBASIC20.13■□□□□ 0.81
PCNX1Q96RV3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 AC092171.4-201ENST00000609130 632 ntBASIC20.13■□□□□ 0.81
PCNX1Q96RV3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX1Q96RV3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.12■□□□□ 0.81
PCNX1Q96RV3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX1Q96RV3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.11■□□□□ 0.81
PCNX1Q96RV3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms