Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BBS4Q96RK4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS4Q96RK4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS4Q96RK4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.51■■□□□ 1.03
BBS4Q96RK4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.51■■□□□ 1.03
BBS4Q96RK4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS4Q96RK4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BBS4Q96RK4 ALDH1A3-203ENST00000557963 1670 ntBASIC21.5■■□□□ 1.03
BBS4Q96RK4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BBS4Q96RK4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BBS4Q96RK4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BBS4Q96RK4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.5■■□□□ 1.03
BBS4Q96RK4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS4Q96RK4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS4Q96RK4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS4Q96RK4 AC004448.1-201ENST00000458332 883 ntBASIC21.49■■□□□ 1.03
BBS4Q96RK4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.49■■□□□ 1.03
BBS4Q96RK4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
BBS4Q96RK4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BBS4Q96RK4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BBS4Q96RK4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.49■■□□□ 1.03
BBS4Q96RK4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS4Q96RK4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.48■■□□□ 1.03
BBS4Q96RK4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
BBS4Q96RK4 AC137630.3-201ENST00000607245 391 ntBASIC21.48■■□□□ 1.03
BBS4Q96RK4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS4Q96RK4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.48■■□□□ 1.03
BBS4Q96RK4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BBS4Q96RK4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS4Q96RK4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.47■■□□□ 1.03
BBS4Q96RK4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.47■■□□□ 1.03
BBS4Q96RK4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
BBS4Q96RK4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
BBS4Q96RK4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.47■■□□□ 1.03
BBS4Q96RK4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.47■■□□□ 1.03
BBS4Q96RK4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS4Q96RK4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BBS4Q96RK4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS4Q96RK4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS4Q96RK4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS4Q96RK4 RARRES2P1-201ENST00000474487 481 ntBASIC21.46■■□□□ 1.03
BBS4Q96RK4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.46■■□□□ 1.03
BBS4Q96RK4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS4Q96RK4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
BBS4Q96RK4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
BBS4Q96RK4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.45■■□□□ 1.02
BBS4Q96RK4 BX664725.1-201ENST00000438252 379 ntBASIC21.45■■□□□ 1.02
BBS4Q96RK4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.45■■□□□ 1.02
BBS4Q96RK4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.45■■□□□ 1.02
BBS4Q96RK4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BBS4Q96RK4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BBS4Q96RK4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BBS4Q96RK4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BBS4Q96RK4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BBS4Q96RK4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS4Q96RK4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS4Q96RK4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.44■■□□□ 1.02
BBS4Q96RK4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.43■■□□□ 1.02
BBS4Q96RK4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.43■■□□□ 1.02
BBS4Q96RK4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.43■■□□□ 1.02
BBS4Q96RK4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS4Q96RK4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
BBS4Q96RK4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
BBS4Q96RK4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BBS4Q96RK4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BBS4Q96RK4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BBS4Q96RK4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.42■■□□□ 1.02
BBS4Q96RK4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BBS4Q96RK4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
BBS4Q96RK4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.42■■□□□ 1.02
BBS4Q96RK4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.42■■□□□ 1.02
BBS4Q96RK4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms