Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC005703.6-201ENST00000623265 1329 ntBASIC17.67■□□□□ 0.42
DUX3Q96PT4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX3Q96PT4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.66■□□□□ 0.42
DUX3Q96PT4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX3Q96PT4 MIR638-201ENST00000385237 100 ntBASIC17.66■□□□□ 0.42
DUX3Q96PT4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX3Q96PT4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX3Q96PT4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX3Q96PT4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX3Q96PT4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX3Q96PT4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
DUX3Q96PT4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX3Q96PT4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX3Q96PT4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX3Q96PT4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DUX3Q96PT4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX3Q96PT4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUX3Q96PT4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX3Q96PT4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX3Q96PT4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DUX3Q96PT4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DUX3Q96PT4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.64■□□□□ 0.41
DUX3Q96PT4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX3Q96PT4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DUX3Q96PT4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
DUX3Q96PT4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.63■□□□□ 0.41
DUX3Q96PT4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUX3Q96PT4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DUX3Q96PT4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX3Q96PT4 SRD5A1P1-201ENST00000442297 786 ntBASIC17.62■□□□□ 0.41
DUX3Q96PT4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.62■□□□□ 0.41
DUX3Q96PT4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.62■□□□□ 0.41
DUX3Q96PT4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DUX3Q96PT4 AC138932.3-201ENST00000567634 1902 ntBASIC17.62■□□□□ 0.41
DUX3Q96PT4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX3Q96PT4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DUX3Q96PT4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.62■□□□□ 0.41
DUX3Q96PT4 AC020928.2-201ENST00000588717 2197 ntBASIC17.62■□□□□ 0.41
DUX3Q96PT4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DUX3Q96PT4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DUX3Q96PT4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DUX3Q96PT4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DUX3Q96PT4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DUX3Q96PT4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DUX3Q96PT4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DUX3Q96PT4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DUX3Q96PT4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DUX3Q96PT4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DUX3Q96PT4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DUX3Q96PT4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 UNC93B3-201ENST00000308076 687 ntBASIC17.59■□□□□ 0.41
DUX3Q96PT4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 PBX2P1-201ENST00000493219 1291 ntBASIC17.59■□□□□ 0.41
DUX3Q96PT4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DUX3Q96PT4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
DUX3Q96PT4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms