Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.11■■□□□ 1.29
CLDN23Q96B33 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CLDN23Q96B33 ID1-201ENST00000376105 1233 ntBASIC23.11■■□□□ 1.29
CLDN23Q96B33 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CLDN23Q96B33 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN23Q96B33 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN23Q96B33 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN23Q96B33 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN23Q96B33 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN23Q96B33 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CLDN23Q96B33 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN23Q96B33 TSPY26P-201ENST00000476365 1326 ntBASIC23.09■■□□□ 1.29
CLDN23Q96B33 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN23Q96B33 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN23Q96B33 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN23Q96B33 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN23Q96B33 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN23Q96B33 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN23Q96B33 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN23Q96B33 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN23Q96B33 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN23Q96B33 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CLDN23Q96B33 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN23Q96B33 AC004911.1-201ENST00000416316 871 ntBASIC23.08■■□□□ 1.29
CLDN23Q96B33 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.08■■□□□ 1.29
CLDN23Q96B33 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.08■■□□□ 1.29
CLDN23Q96B33 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CLDN23Q96B33 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN23Q96B33 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN23Q96B33 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN23Q96B33 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.07■■□□□ 1.28
CLDN23Q96B33 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN23Q96B33 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN23Q96B33 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN23Q96B33 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.06■■□□□ 1.28
CLDN23Q96B33 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.06■■□□□ 1.28
CLDN23Q96B33 pRNA.6-201ENST00000610482 90 ntBASIC23.06■■□□□ 1.28
CLDN23Q96B33 pRNA.5-201ENST00000612139 90 ntBASIC23.06■■□□□ 1.28
CLDN23Q96B33 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.06■■□□□ 1.28
CLDN23Q96B33 pRNA.11-201ENST00000618423 90 ntBASIC23.06■■□□□ 1.28
CLDN23Q96B33 pRNA.13-201ENST00000619112 90 ntBASIC23.06■■□□□ 1.28
CLDN23Q96B33 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN23Q96B33 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CLDN23Q96B33 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.06■■□□□ 1.28
CLDN23Q96B33 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.06■■□□□ 1.28
CLDN23Q96B33 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN23Q96B33 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.05■■□□□ 1.28
CLDN23Q96B33 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN23Q96B33 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.05■■□□□ 1.28
CLDN23Q96B33 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.05■■□□□ 1.28
CLDN23Q96B33 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN23Q96B33 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.05■■□□□ 1.28
CLDN23Q96B33 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN23Q96B33 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN23Q96B33 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN23Q96B33 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN23Q96B33 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN23Q96B33 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.04■■□□□ 1.28
CLDN23Q96B33 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.04■■□□□ 1.28
CLDN23Q96B33 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CLDN23Q96B33 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CLDN23Q96B33 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN23Q96B33 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN23Q96B33 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLDN23Q96B33 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.03■■□□□ 1.28
CLDN23Q96B33 MIR572-201ENST00000384983 95 ntBASIC23.03■■□□□ 1.28
CLDN23Q96B33 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.03■■□□□ 1.28
CLDN23Q96B33 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.03■■□□□ 1.28
CLDN23Q96B33 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.03■■□□□ 1.28
CLDN23Q96B33 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLDN23Q96B33 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN23Q96B33 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN23Q96B33 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.02■■□□□ 1.28
CLDN23Q96B33 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN23Q96B33 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN23Q96B33 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CLDN23Q96B33 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.02■■□□□ 1.28
CLDN23Q96B33 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.02■■□□□ 1.28
CLDN23Q96B33 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.02■■□□□ 1.28
CLDN23Q96B33 MIR6089-201ENST00000616698 64 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms