Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
VPS33AQ96AX1 AC233723.2-201ENST00000623798 2106 ntBASIC21.83■■□□□ 1.08
VPS33AQ96AX1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
VPS33AQ96AX1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
VPS33AQ96AX1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS33AQ96AX1 RNF126P1-201ENST00000567452 1320 ntBASIC21.81■■□□□ 1.08
VPS33AQ96AX1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 AC092068.2-201ENST00000590491 1708 ntBASIC21.81■■□□□ 1.08
VPS33AQ96AX1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 AC087393.1-201ENST00000582896 145 ntBASIC21.81■■□□□ 1.08
VPS33AQ96AX1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS33AQ96AX1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.8■■□□□ 1.08
VPS33AQ96AX1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 C1orf229-201ENST00000623686 2258 ntBASIC21.8■■□□□ 1.08
VPS33AQ96AX1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS33AQ96AX1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 AL592295.1-201ENST00000400984 884 ntBASIC21.79■■□□□ 1.08
VPS33AQ96AX1 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.79■■□□□ 1.08
VPS33AQ96AX1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS33AQ96AX1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.78■■□□□ 1.08
VPS33AQ96AX1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
VPS33AQ96AX1 EP400NL-214ENST00000641289 2402 ntBASIC21.78■■□□□ 1.08
VPS33AQ96AX1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
VPS33AQ96AX1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS33AQ96AX1 AL161729.1-201ENST00000604104 1402 ntBASIC21.76■■□□□ 1.07
VPS33AQ96AX1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 DUX4L9-201ENST00000449051 1259 ntBASIC21.75■■□□□ 1.07
VPS33AQ96AX1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS33AQ96AX1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS33AQ96AX1 CLDN5-201ENST00000403084 2357 ntBASIC21.74■■□□□ 1.07
VPS33AQ96AX1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS33AQ96AX1 MIR6765-201ENST00000614092 87 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms