Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L29-201ENST00000425409 679 ntBASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L1Q8WWY6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 AC126177.7-201ENST00000547904 679 ntBASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 AC044849.2-201ENST00000606596 710 ntBASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.86■□□□□ 0.45
MBD3L1Q8WWY6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L13-201ENST00000554103 1267 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L15-201ENST00000611059 1267 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L23-201ENST00000615195 1269 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L24-201ENST00000617576 1269 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L22-201ENST00000618238 1269 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L20-201ENST00000619712 1269 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L21-201ENST00000622058 1269 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L10-201ENST00000622460 1267 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 DUX4L25-201ENST00000624915 1269 ntBASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD3L1Q8WWY6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 HLA-V-202ENST00000446817 847 ntBASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD3L1Q8WWY6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD3L1Q8WWY6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD3L1Q8WWY6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD3L1Q8WWY6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD3L1Q8WWY6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD3L1Q8WWY6 AL161729.1-201ENST00000604104 1402 ntBASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L1Q8WWY6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms