Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
STAG1Q8WVM7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
STAG1Q8WVM7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
STAG1Q8WVM7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
STAG1Q8WVM7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
STAG1Q8WVM7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
STAG1Q8WVM7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
STAG1Q8WVM7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.96■■□□□ 1.91
STAG1Q8WVM7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
STAG1Q8WVM7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.91
STAG1Q8WVM7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.95■■□□□ 1.9
STAG1Q8WVM7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 AL356740.2-201ENST00000601559 647 ntBASIC26.94■■□□□ 1.9
STAG1Q8WVM7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
STAG1Q8WVM7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 AC131281.2-201ENST00000520478 145 ntBASIC26.93■■□□□ 1.9
STAG1Q8WVM7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
STAG1Q8WVM7 AC093323.1-202ENST00000635031 2045 ntBASIC26.93■■□□□ 1.9
STAG1Q8WVM7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
STAG1Q8WVM7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 ABCB10P4-201ENST00000566803 2184 ntBASIC26.91■■□□□ 1.9
STAG1Q8WVM7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
STAG1Q8WVM7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.9■■□□□ 1.9
STAG1Q8WVM7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
STAG1Q8WVM7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
STAG1Q8WVM7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.89■■□□□ 1.9
STAG1Q8WVM7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.89■■□□□ 1.9
STAG1Q8WVM7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.89■■□□□ 1.9
STAG1Q8WVM7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.88■■□□□ 1.89
STAG1Q8WVM7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
STAG1Q8WVM7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.87■■□□□ 1.89
STAG1Q8WVM7 AL512631.2-201ENST00000604634 923 ntBASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms