Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF138Q8WVD3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RNF138Q8WVD3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF138Q8WVD3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF138Q8WVD3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 AL356740.2-201ENST00000601559 647 ntBASIC20.75■□□□□ 0.91
RNF138Q8WVD3 AL512631.2-201ENST00000604634 923 ntBASIC20.75■□□□□ 0.91
RNF138Q8WVD3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF138Q8WVD3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF138Q8WVD3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.73■□□□□ 0.91
RNF138Q8WVD3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.73■□□□□ 0.91
RNF138Q8WVD3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF138Q8WVD3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF138Q8WVD3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF138Q8WVD3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF138Q8WVD3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF138Q8WVD3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF138Q8WVD3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF138Q8WVD3 AC009102.2-201ENST00000606772 1639 ntBASIC20.7■□□□□ 0.9
RNF138Q8WVD3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF138Q8WVD3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF138Q8WVD3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 AC131281.2-201ENST00000520478 145 ntBASIC20.69■□□□□ 0.9
RNF138Q8WVD3 AC131212.1-201ENST00000613771 668 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms