Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 SUZ12P1-203ENST00000578195 985 ntBASIC20.22■□□□□ 0.83
DYNC2LI1Q8TCX1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DYNC2LI1Q8TCX1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DYNC2LI1Q8TCX1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DYNC2LI1Q8TCX1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DYNC2LI1Q8TCX1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.21■□□□□ 0.83
DYNC2LI1Q8TCX1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.2■□□□□ 0.83
DYNC2LI1Q8TCX1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 C11orf96-202ENST00000528572 1834 ntBASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
DYNC2LI1Q8TCX1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DYNC2LI1Q8TCX1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DYNC2LI1Q8TCX1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DYNC2LI1Q8TCX1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DYNC2LI1Q8TCX1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DYNC2LI1Q8TCX1 AC148477.6-201ENST00000623746 465 ntBASIC20.17■□□□□ 0.82
DYNC2LI1Q8TCX1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DYNC2LI1Q8TCX1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.17■□□□□ 0.82
DYNC2LI1Q8TCX1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.16■□□□□ 0.82
DYNC2LI1Q8TCX1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 AC139530.1-201ENST00000575312 1977 ntBASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
DYNC2LI1Q8TCX1 AC026310.3-201ENST00000625186 2373 ntBASIC20.14■□□□□ 0.82
DYNC2LI1Q8TCX1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 AC092053.2-201ENST00000640557 1818 ntBASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DYNC2LI1Q8TCX1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.13■□□□□ 0.81
DYNC2LI1Q8TCX1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DYNC2LI1Q8TCX1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms