Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMARCC2Q8TAQ2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMARCC2Q8TAQ2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.75■■□□□ 1.87
SMARCC2Q8TAQ2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMARCC2Q8TAQ2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.74■■□□□ 1.87
SMARCC2Q8TAQ2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 AL022069.1-201ENST00000568025 1636 ntBASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SMARCC2Q8TAQ2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 DUSP8P5-201ENST00000422884 1815 ntBASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SMARCC2Q8TAQ2 AF131216.4-201ENST00000638924 1588 ntBASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.71■■□□□ 1.87
SMARCC2Q8TAQ2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.7■■□□□ 1.87
SMARCC2Q8TAQ2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMARCC2Q8TAQ2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.7■■□□□ 1.86
SMARCC2Q8TAQ2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC2Q8TAQ2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC2Q8TAQ2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
SMARCC2Q8TAQ2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC2Q8TAQ2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMARCC2Q8TAQ2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.69■■□□□ 1.86
SMARCC2Q8TAQ2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 TSPY9P-201ENST00000440215 945 ntBASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 TSPY11P-201ENST00000442607 1045 ntBASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 AC092028.1-203ENST00000608262 953 ntBASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.68■■□□□ 1.86
SMARCC2Q8TAQ2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 AL356441.2-201ENST00000443009 864 ntBASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMARCC2Q8TAQ2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 UNC93B8-201ENST00000511903 705 ntBASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC2Q8TAQ2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC2Q8TAQ2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC2Q8TAQ2 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms