Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 ALDH1A3-203ENST00000557963 1670 ntBASIC24.9■■□□□ 1.58
ZSWIM2Q8NEG5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZSWIM2Q8NEG5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
ZSWIM2Q8NEG5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 MIR6722-201ENST00000617286 78 ntBASIC24.89■■□□□ 1.58
ZSWIM2Q8NEG5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
ZSWIM2Q8NEG5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
ZSWIM2Q8NEG5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
ZSWIM2Q8NEG5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
ZSWIM2Q8NEG5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 KRT16P3-201ENST00000439127 1283 ntBASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ZSWIM2Q8NEG5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ZSWIM2Q8NEG5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
ZSWIM2Q8NEG5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.85■■□□□ 1.57
ZSWIM2Q8NEG5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
ZSWIM2Q8NEG5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZSWIM2Q8NEG5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
ZSWIM2Q8NEG5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ZSWIM2Q8NEG5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.82■■□□□ 1.56
ZSWIM2Q8NEG5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.82■■□□□ 1.56
ZSWIM2Q8NEG5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZSWIM2Q8NEG5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZSWIM2Q8NEG5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZSWIM2Q8NEG5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZSWIM2Q8NEG5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZSWIM2Q8NEG5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.81■■□□□ 1.56
ZSWIM2Q8NEG5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 MIR6724-1-201ENST00000616420 92 ntBASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 MIR6724-2-201ENST00000616483 92 ntBASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 MIR6724-4-201ENST00000617390 92 ntBASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 MIR6724-3-201ENST00000622482 92 ntBASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZSWIM2Q8NEG5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms