Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF439Q8NDP4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF439Q8NDP4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
ZNF439Q8NDP4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.77■□□□□ 0.59
ZNF439Q8NDP4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 KRT8P33-201ENST00000508125 1423 ntBASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 AC103724.3-201ENST00000564481 992 ntBASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF439Q8NDP4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 YBX1P4-201ENST00000392794 808 ntBASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF439Q8NDP4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF439Q8NDP4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
ZNF439Q8NDP4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF439Q8NDP4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF439Q8NDP4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF439Q8NDP4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms