Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SMRP1Q8NCR6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.88■■□□□ 1.41
SMRP1Q8NCR6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SMRP1Q8NCR6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 AC010501.1-201ENST00000606270 1962 ntBASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 AL022069.1-201ENST00000568025 1636 ntBASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.86■■□□□ 1.41
SMRP1Q8NCR6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SMRP1Q8NCR6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMRP1Q8NCR6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMRP1Q8NCR6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.85■■□□□ 1.41
SMRP1Q8NCR6 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.85■■□□□ 1.41
SMRP1Q8NCR6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.85■■□□□ 1.41
SMRP1Q8NCR6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 CCDC92B-201ENST00000575506 885 ntBASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMRP1Q8NCR6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 pRNA.6-201ENST00000610482 90 ntBASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 pRNA.5-201ENST00000612139 90 ntBASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 pRNA.11-201ENST00000618423 90 ntBASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 pRNA.13-201ENST00000619112 90 ntBASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 MIR6084-201ENST00000622012 110 ntBASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SMRP1Q8NCR6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SMRP1Q8NCR6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
SMRP1Q8NCR6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 MIR572-201ENST00000384983 95 ntBASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 IGHV3-19-201ENST00000521488 291 ntBASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 AC012414.1-201ENST00000556676 535 ntBASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SMRP1Q8NCR6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 NTF6G-201ENST00000591094 616 ntBASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 AL354811.1-201ENST00000610286 706 ntBASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.81■■□□□ 1.4
SMRP1Q8NCR6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 HLA-L-209ENST00000420110 1011 ntBASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMRP1Q8NCR6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.79■■□□□ 1.4
SMRP1Q8NCR6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMRP1Q8NCR6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMRP1Q8NCR6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms