Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 AC008406.3-201ENST00000620001 1374 ntBASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH20Q8N6Y1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 AC131281.2-201ENST00000520478 145 ntBASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 AL139125.2-201ENST00000623134 1869 ntBASIC23.21■■□□□ 1.31
PCDH20Q8N6Y1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH20Q8N6Y1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH20Q8N6Y1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH20Q8N6Y1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 AL512631.2-201ENST00000604634 923 ntBASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH20Q8N6Y1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH20Q8N6Y1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH20Q8N6Y1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH20Q8N6Y1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH20Q8N6Y1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PCDH20Q8N6Y1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms