Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB42Q8N4Z0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAB42Q8N4Z0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RAB42Q8N4Z0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
RAB42Q8N4Z0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 MIR6724-1-201ENST00000616420 92 ntBASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 MIR6724-2-201ENST00000616483 92 ntBASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 MIR6724-4-201ENST00000617390 92 ntBASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 MIR6724-3-201ENST00000622482 92 ntBASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB42Q8N4Z0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB42Q8N4Z0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.13■■□□□ 1.13
RAB42Q8N4Z0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.13■■□□□ 1.13
RAB42Q8N4Z0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.13■■□□□ 1.13
RAB42Q8N4Z0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RAB42Q8N4Z0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB42Q8N4Z0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB42Q8N4Z0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB42Q8N4Z0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB42Q8N4Z0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAB42Q8N4Z0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 AL356441.2-201ENST00000443009 864 ntBASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB42Q8N4Z0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAB42Q8N4Z0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 AC004812.2-201ENST00000611079 2094 ntBASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAB42Q8N4Z0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB42Q8N4Z0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB42Q8N4Z0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RAB42Q8N4Z0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.08■■□□□ 1.13
RAB42Q8N4Z0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.08■■□□□ 1.13
RAB42Q8N4Z0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.08■■□□□ 1.13
RAB42Q8N4Z0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RAB42Q8N4Z0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
RAB42Q8N4Z0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RAB42Q8N4Z0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RAB42Q8N4Z0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB42Q8N4Z0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB42Q8N4Z0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 682.9 ms