Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SFTPA1Q8IWL2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SFTPA1Q8IWL2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SFTPA1Q8IWL2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.24■■□□□ 1.31
SFTPA1Q8IWL2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SFTPA1Q8IWL2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.23■■□□□ 1.31
SFTPA1Q8IWL2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.23■■□□□ 1.31
SFTPA1Q8IWL2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.23■■□□□ 1.31
SFTPA1Q8IWL2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.23■■□□□ 1.31
SFTPA1Q8IWL2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SFTPA1Q8IWL2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 AC091305.1-201ENST00000479476 895 ntBASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SFTPA1Q8IWL2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 AC008764.7-201ENST00000593779 1081 ntBASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 CA15P2-201ENST00000611168 834 ntBASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 AC022211.4-201ENST00000625094 2161 ntBASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SFTPA1Q8IWL2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 AC092171.4-201ENST00000609130 632 ntBASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SFTPA1Q8IWL2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.18■■□□□ 1.3
SFTPA1Q8IWL2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.18■■□□□ 1.3
SFTPA1Q8IWL2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.18■■□□□ 1.3
SFTPA1Q8IWL2 AC092666.2-201ENST00000613287 246 ntBASIC23.18■■□□□ 1.3
SFTPA1Q8IWL2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SFTPA1Q8IWL2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 MIR3181-201ENST00000578512 73 ntBASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 AC011298.3-201ENST00000615796 283 ntBASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.16■■□□□ 1.3
SFTPA1Q8IWL2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 AC099791.1-201ENST00000416440 715 ntBASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SFTPA1Q8IWL2 RASA4CP-201ENST00000424092 1398 ntBASIC23.14■■□□□ 1.3
SFTPA1Q8IWL2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms