Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.69■■□□□ 1.22
ZC3HC1Q86WB0 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.69■■□□□ 1.22
ZC3HC1Q86WB0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3HC1Q86WB0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.69■■□□□ 1.22
ZC3HC1Q86WB0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
ZC3HC1Q86WB0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 AF131216.4-201ENST00000638924 1588 ntBASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 KRT18P24-201ENST00000344739 1156 ntBASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 AC010980.1-201ENST00000587192 1142 ntBASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3HC1Q86WB0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3HC1Q86WB0 DUSP8P3-201ENST00000399571 1760 ntBASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 MIR4281-201ENST00000580852 62 ntBASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.66■■□□□ 1.22
ZC3HC1Q86WB0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 THA1P-201ENST00000590384 1145 ntBASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZC3HC1Q86WB0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZC3HC1Q86WB0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZC3HC1Q86WB0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZC3HC1Q86WB0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
ZC3HC1Q86WB0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZC3HC1Q86WB0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZC3HC1Q86WB0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.64■■□□□ 1.21
ZC3HC1Q86WB0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZC3HC1Q86WB0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.63■■□□□ 1.21
ZC3HC1Q86WB0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3HC1Q86WB0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3HC1Q86WB0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 AC012354.3-201ENST00000623734 483 ntBASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3HC1Q86WB0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms