Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS13CQ709C8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS13CQ709C8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS13CQ709C8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS13CQ709C8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 TERF1P2-201ENST00000583350 1212 ntBASIC19.22■□□□□ 0.67
VPS13CQ709C8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS13CQ709C8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS13CQ709C8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS13CQ709C8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS13CQ709C8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 SLC6A10P-202ENST00000431994 2058 ntBASIC19.21■□□□□ 0.67
VPS13CQ709C8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS13CQ709C8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS13CQ709C8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS13CQ709C8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VPS13CQ709C8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS13CQ709C8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS13CQ709C8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VPS13CQ709C8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS13CQ709C8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VPS13CQ709C8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VPS13CQ709C8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.2■□□□□ 0.66
VPS13CQ709C8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS13CQ709C8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS13CQ709C8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS13CQ709C8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VPS13CQ709C8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS13CQ709C8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS13CQ709C8 AC135731.1-201ENST00000569415 2548 ntBASIC19.2■□□□□ 0.66
VPS13CQ709C8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.19■□□□□ 0.66
VPS13CQ709C8 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.19■□□□□ 0.66
VPS13CQ709C8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.19■□□□□ 0.66
VPS13CQ709C8 AC010501.1-201ENST00000606270 1962 ntBASIC19.19■□□□□ 0.66
VPS13CQ709C8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.19■□□□□ 0.66
VPS13CQ709C8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS13CQ709C8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS13CQ709C8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS13CQ709C8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS13CQ709C8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS13CQ709C8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS13CQ709C8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS13CQ709C8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS13CQ709C8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS13CQ709C8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 ABHD17AP1-201ENST00000358206 933 ntBASIC19.18■□□□□ 0.66
VPS13CQ709C8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS13CQ709C8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS13CQ709C8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VPS13CQ709C8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.17■□□□□ 0.66
VPS13CQ709C8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS13CQ709C8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VPS13CQ709C8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS13CQ709C8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS13CQ709C8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS13CQ709C8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VPS13CQ709C8 AL358852.1-201ENST00000623174 1268 ntBASIC19.17■□□□□ 0.66
VPS13CQ709C8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
VPS13CQ709C8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS13CQ709C8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS13CQ709C8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS13CQ709C8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS13CQ709C8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS13CQ709C8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS13CQ709C8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS13CQ709C8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VPS13CQ709C8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS13CQ709C8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS13CQ709C8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS13CQ709C8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS13CQ709C8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS13CQ709C8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS13CQ709C8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS13CQ709C8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS13CQ709C8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS13CQ709C8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS13CQ709C8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS13CQ709C8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
VPS13CQ709C8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS13CQ709C8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.14■□□□□ 0.66
VPS13CQ709C8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS13CQ709C8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms