Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FREM1Q5H8C1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM1Q5H8C1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FREM1Q5H8C1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM1Q5H8C1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM1Q5H8C1 AC110285.6-201ENST00000617652 491 ntBASIC20.15■□□□□ 0.82
FREM1Q5H8C1 AC008406.3-201ENST00000620001 1374 ntBASIC20.14■□□□□ 0.82
FREM1Q5H8C1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
FREM1Q5H8C1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
FREM1Q5H8C1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FREM1Q5H8C1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.14■□□□□ 0.81
FREM1Q5H8C1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.14■□□□□ 0.81
FREM1Q5H8C1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FREM1Q5H8C1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
FREM1Q5H8C1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FREM1Q5H8C1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
FREM1Q5H8C1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 AL139125.2-201ENST00000623134 1869 ntBASIC20.12■□□□□ 0.81
FREM1Q5H8C1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM1Q5H8C1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 AL136116.3-201ENST00000402907 1138 ntBASIC20.11■□□□□ 0.81
FREM1Q5H8C1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM1Q5H8C1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
FREM1Q5H8C1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.09■□□□□ 0.81
FREM1Q5H8C1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FREM1Q5H8C1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FREM1Q5H8C1 C17orf82-201ENST00000623772 1530 ntBASIC20.07■□□□□ 0.8
FREM1Q5H8C1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM1Q5H8C1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM1Q5H8C1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM1Q5H8C1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FREM1Q5H8C1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM1Q5H8C1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
FREM1Q5H8C1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms