Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AC008764.7-201ENST00000593779 1081 ntBASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 AC104564.3-201ENST00000582367 638 ntBASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 MIR6821-201ENST00000617625 74 ntBASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRTCAP3Q53RY4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KRTCAP3Q53RY4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.47■□□□□ 0.87
KRTCAP3Q53RY4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRTCAP3Q53RY4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.47■□□□□ 0.87
KRTCAP3Q53RY4 AC009086.3-201ENST00000623486 1008 ntBASIC20.47■□□□□ 0.87
KRTCAP3Q53RY4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRTCAP3Q53RY4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 IRS3P-201ENST00000223076 1006 ntBASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 AC099791.1-201ENST00000416440 715 ntBASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 AC097381.1-201ENST00000429019 1296 ntBASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRTCAP3Q53RY4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 AC233992.3-201ENST00000607491 485 ntBASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRTCAP3Q53RY4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 BX842568.3-201ENST00000418104 571 ntBASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRTCAP3Q53RY4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 MIR3181-201ENST00000578512 73 ntBASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRTCAP3Q53RY4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
KRTCAP3Q53RY4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms