Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNAI3Q3KNW1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.76■□□□□ 0.75
SNAI3Q3KNW1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 AC004448.1-201ENST00000458332 883 ntBASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI3Q3KNW1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 AC137630.3-201ENST00000607245 391 ntBASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI3Q3KNW1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI3Q3KNW1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 RARRES2P1-201ENST00000474487 481 ntBASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 ANOS2P-203ENST00000472227 1816 ntBASIC19.72■□□□□ 0.75
SNAI3Q3KNW1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI3Q3KNW1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 SNX5-217ENST00000606557 1087 ntBASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNAI3Q3KNW1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.69■□□□□ 0.74
SNAI3Q3KNW1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAI3Q3KNW1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms