Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 MIR572-201ENST00000384983 95 ntBASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO4Q2I0M5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 AC016769.1-201ENST00000409132 1010 ntBASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 AC006015.1-201ENST00000429970 570 ntBASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 AC006970.2-201ENST00000450065 779 ntBASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 LINC02228-203ENST00000641970 1355 ntBASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
RSPO4Q2I0M5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 AC009086.3-201ENST00000623486 1008 ntBASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RSPO4Q2I0M5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 C17orf82-201ENST00000623772 1530 ntBASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.33■■□□□ 1.17
RSPO4Q2I0M5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RSPO4Q2I0M5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RSPO4Q2I0M5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO4Q2I0M5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO4Q2I0M5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 AC137761.2-201ENST00000561729 223 ntBASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 AC145350.3-201ENST00000569033 163 ntBASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 AL499627.2-201ENST00000606283 725 ntBASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.3■■□□□ 1.16
RSPO4Q2I0M5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 IGHV3-19-201ENST00000521488 291 ntBASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO4Q2I0M5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 AC093827.2-201ENST00000512654 315 ntBASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO4Q2I0M5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms