Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YOL035CYOL035C 303 nt5.66□□□□□ -1.5
SSL2Q00578 MDY2YOL111C 639 nt5.66□□□□□ -1.5
SSL2Q00578 YPL014WYPL014W 1146 nt5.66□□□□□ -1.5
SSL2Q00578 SUE1YPR151C 621 nt5.66□□□□□ -1.5
SSL2Q00578 QCR2YPR191W 1107 nt5.66□□□□□ -1.5
SSL2Q00578 CDC4YFL009W 2340 nt5.66□□□□□ -1.5
SSL2Q00578 WTM1YOR230W 1314 nt5.66□□□□□ -1.5
SSL2Q00578 OMS1YDR316W 1416 nt5.65□□□□□ -1.5
SSL2Q00578 ROT2YBR229C 2865 nt5.65□□□□□ -1.5
SSL2Q00578 MHF2YDL160C-A 243 nt5.65□□□□□ -1.5
SSL2Q00578 YDR336WYDR336W 945 nt5.65□□□□□ -1.5
SSL2Q00578 SEC28YIL076W 891 nt5.65□□□□□ -1.5
SSL2Q00578 YKL107WYKL107W 930 nt5.65□□□□□ -1.5
SSL2Q00578 ERG29YMR134W 714 nt5.65□□□□□ -1.5
SSL2Q00578 YMR245WYMR245W 621 nt5.65□□□□□ -1.5
SSL2Q00578 RCE1YMR274C 948 nt5.65□□□□□ -1.5
SSL2Q00578 SCW10YMR305C 1170 nt5.65□□□□□ -1.5
SSL2Q00578 ARG1YOL058W 1263 nt5.65□□□□□ -1.5
SSL2Q00578 TFB6YOR352W 1032 nt5.65□□□□□ -1.5
SSL2Q00578 snR17bsnR17b 332 nt5.65□□□□□ -1.5
SSL2Q00578 YSA1YBR111C 696 nt5.65□□□□□ -1.5
SSL2Q00578 LCB2YDR062W 1686 nt5.65□□□□□ -1.51
SSL2Q00578 OCA5YHL029C 2040 nt5.65□□□□□ -1.51
SSL2Q00578 RRP17YDR412W 708 nt5.64□□□□□ -1.51
SSL2Q00578 YHL044WYHL044W 708 nt5.64□□□□□ -1.51
SSL2Q00578 OSW5YMR148W 447 nt5.64□□□□□ -1.51
SSL2Q00578 NUR1YDL089W 1455 nt5.64□□□□□ -1.51
SSL2Q00578 APE1YKL103C 1545 nt5.64□□□□□ -1.51
SSL2Q00578 VAN1YML115C 1608 nt5.63□□□□□ -1.51
SSL2Q00578 PCL2YDL127W 927 nt5.63□□□□□ -1.51
SSL2Q00578 YDR417CYDR417C 372 nt5.63□□□□□ -1.51
SSL2Q00578 AUA1YFL010W-A 285 nt5.63□□□□□ -1.51
SSL2Q00578 SOL1YNR034W 966 nt5.63□□□□□ -1.51
SSL2Q00578 SFT2YBL102W 648 nt5.63□□□□□ -1.51
SSL2Q00578 SUT2YPR009W 807 nt5.63□□□□□ -1.51
SSL2Q00578 snR32snR32 188 nt5.63□□□□□ -1.51
SSL2Q00578 APJ1YNL077W 1587 nt5.63□□□□□ -1.51
SSL2Q00578 ADE3YGR204W 2841 nt5.62□□□□□ -1.51
SSL2Q00578 IML2YJL082W 2196 nt5.62□□□□□ -1.51
SSL2Q00578 HSP31YDR533C 714 nt5.62□□□□□ -1.51
SSL2Q00578 THI5YFL058W 1023 nt5.62□□□□□ -1.51
SSL2Q00578 RPT6YGL048C 1218 nt5.62□□□□□ -1.51
SSL2Q00578 CTR2YHR175W 570 nt5.62□□□□□ -1.51
SSL2Q00578 EGD2YHR193C 525 nt5.62□□□□□ -1.51
SSL2Q00578 ECM9YKR004C 1134 nt5.62□□□□□ -1.51
SSL2Q00578 YBL029C-AYBL029C-A 285 nt5.62□□□□□ -1.51
SSL2Q00578 FAR3YMR052W 615 nt5.62□□□□□ -1.51
SSL2Q00578 THI12YNL332W 1023 nt5.62□□□□□ -1.51
SSL2Q00578 PPG1YNR032W 1107 nt5.62□□□□□ -1.51
SSL2Q00578 TLG2YOL018C 1194 nt5.62□□□□□ -1.51
SSL2Q00578 ZUO1YGR285C 1302 nt5.62□□□□□ -1.51
SSL2Q00578 NOB1YOR056C 1380 nt5.62□□□□□ -1.51
SSL2Q00578 MDM10YAL010C 1482 nt5.62□□□□□ -1.51
SSL2Q00578 AXL2YIL140W 2472 nt5.62□□□□□ -1.51
SSL2Q00578 NOT3YIL038C 2511 nt5.62□□□□□ -1.51
SSL2Q00578 MSH1YHR120W 2880 nt5.61□□□□□ -1.51
SSL2Q00578 PHO92YDR374C 921 nt5.61□□□□□ -1.51
SSL2Q00578 URA3YEL021W 804 nt5.61□□□□□ -1.51
SSL2Q00578 SLD2YKL108W 1362 nt5.61□□□□□ -1.51
SSL2Q00578 TOM40YMR203W 1164 nt5.61□□□□□ -1.51
SSL2Q00578 MRE11YMR224C 2079 nt5.61□□□□□ -1.51
SSL2Q00578 LAP2YNL045W 2016 nt5.61□□□□□ -1.51
SSL2Q00578 SSU72YNL222W 621 nt5.61□□□□□ -1.51
SSL2Q00578 YNL226WYNL226W 411 nt5.61□□□□□ -1.51
SSL2Q00578 CAM1YPL048W 1248 nt5.61□□□□□ -1.51
SSL2Q00578 YNL095CYNL095C 1929 nt5.6□□□□□ -1.51
SSL2Q00578 GCR2YNL199C 1605 nt5.6□□□□□ -1.51
SSL2Q00578 YDL026WYDL026W 312 nt5.6□□□□□ -1.51
SSL2Q00578 HST4YDR191W 1113 nt5.6□□□□□ -1.51
SSL2Q00578 NSE3YDR288W 912 nt5.6□□□□□ -1.51
SSL2Q00578 YFT2YDR319C 825 nt5.6□□□□□ -1.51
SSL2Q00578 YEL050W-AYEL050W-A 192 nt5.6□□□□□ -1.51
SSL2Q00578 PDE1YGL248W 1110 nt5.6□□□□□ -1.51
SSL2Q00578 YHR112CYHR112C 1137 nt5.6□□□□□ -1.51
SSL2Q00578 CBF1YJR060W 1056 nt5.6□□□□□ -1.51
SSL2Q00578 PGU1YJR153W 1086 nt5.6□□□□□ -1.51
SSL2Q00578 MID2YLR332W 1131 nt5.6□□□□□ -1.51
SSL2Q00578 PSY3YLR376C 729 nt5.6□□□□□ -1.51
SSL2Q00578 RPC19YNL113W 429 nt5.6□□□□□ -1.51
SSL2Q00578 VPS68YOL129W 555 nt5.6□□□□□ -1.51
SSL2Q00578 BUB3YOR026W 1026 nt5.6□□□□□ -1.51
SSL2Q00578 TRS33YOR115C 807 nt5.6□□□□□ -1.51
SSL2Q00578 PIB1YDR313C 861 nt5.59□□□□□ -1.51
SSL2Q00578 YFR052C-AYFR052C-A 306 nt5.59□□□□□ -1.51
SSL2Q00578 SKI8YGL213C 1194 nt5.59□□□□□ -1.51
SSL2Q00578 RPF2YKR081C 1035 nt5.59□□□□□ -1.51
SSL2Q00578 MDG1YNL173C 1101 nt5.59□□□□□ -1.51
SSL2Q00578 HAT1YPL001W 1125 nt5.59□□□□□ -1.51
SSL2Q00578 SUM1YDR310C 3189 nt5.59□□□□□ -1.51
SSL2Q00578 DBF2YGR092W 1719 nt5.59□□□□□ -1.51
SSL2Q00578 PWP1YLR196W 1731 nt5.59□□□□□ -1.51
SSL2Q00578 KRE6YPR159W 2163 nt5.59□□□□□ -1.52
SSL2Q00578 ACS2YLR153C 2052 nt5.59□□□□□ -1.52
SSL2Q00578 NDC1YML031W 1968 nt5.58□□□□□ -1.52
SSL2Q00578 JEM1YJL073W 1938 nt5.58□□□□□ -1.52
SSL2Q00578 ASP1YDR321W 1146 nt5.58□□□□□ -1.52
SSL2Q00578 ERV14YGL054C 417 nt5.58□□□□□ -1.52
SSL2Q00578 MRPL13YKR006C 795 nt5.58□□□□□ -1.52
SSL2Q00578 YML090WYML090W 387 nt5.58□□□□□ -1.52
SSL2Q00578 EXO1YOR033C 2109 nt5.58□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms