Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.96■□□□□ 0.47
CCL20P78556 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL20P78556 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCL20P78556 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCL20P78556 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL20P78556 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCL20P78556 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL20P78556 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL20P78556 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCL20P78556 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CCL20P78556 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL20P78556 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL20P78556 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCL20P78556 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
CCL20P78556 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL20P78556 AC073130.3-201ENST00000624389 2278 ntBASIC17.93■□□□□ 0.46
CCL20P78556 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL20P78556 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.93■□□□□ 0.46
CCL20P78556 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL20P78556 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL20P78556 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL20P78556 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL20P78556 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.93■□□□□ 0.46
CCL20P78556 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL20P78556 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL20P78556 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCL20P78556 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.92■□□□□ 0.46
CCL20P78556 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL20P78556 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL20P78556 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL20P78556 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCL20P78556 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL20P78556 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL20P78556 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCL20P78556 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL20P78556 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL20P78556 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.91■□□□□ 0.46
CCL20P78556 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL20P78556 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
CCL20P78556 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCL20P78556 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL20P78556 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCL20P78556 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.9■□□□□ 0.46
CCL20P78556 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL20P78556 AC148477.6-201ENST00000623746 465 ntBASIC17.9■□□□□ 0.46
CCL20P78556 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.9■□□□□ 0.46
CCL20P78556 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCL20P78556 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL20P78556 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCL20P78556 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL20P78556 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL20P78556 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL20P78556 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCL20P78556 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCL20P78556 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
CCL20P78556 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL20P78556 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCL20P78556 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CCL20P78556 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL20P78556 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.89■□□□□ 0.45
CCL20P78556 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL20P78556 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.89■□□□□ 0.45
CCL20P78556 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL20P78556 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCL20P78556 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL20P78556 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL20P78556 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL20P78556 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 PKD1P6-201ENST00000343738 4769 ntBASIC17.88■□□□□ 0.45
CCL20P78556 MIR3665-201ENST00000578708 105 ntBASIC17.88■□□□□ 0.45
CCL20P78556 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL20P78556 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL20P78556 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCL20P78556 FBXW4P1-201ENST00000426721 2239 ntBASIC17.88■□□□□ 0.45
CCL20P78556 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCL20P78556 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCL20P78556 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms