Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.67■□□□□ 0.58
PRRX1P54821 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.67■□□□□ 0.58
PRRX1P54821 AC092028.1-203ENST00000608262 953 ntBASIC18.67■□□□□ 0.58
PRRX1P54821 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRRX1P54821 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRRX1P54821 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRRX1P54821 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRRX1P54821 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.67■□□□□ 0.58
PRRX1P54821 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PRRX1P54821 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.66■□□□□ 0.58
PRRX1P54821 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRRX1P54821 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.65■□□□□ 0.58
PRRX1P54821 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
PRRX1P54821 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.65■□□□□ 0.58
PRRX1P54821 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.65■□□□□ 0.58
PRRX1P54821 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.65■□□□□ 0.58
PRRX1P54821 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRRX1P54821 SNX5-217ENST00000606557 1087 ntBASIC18.65■□□□□ 0.58
PRRX1P54821 AL035685.1-201ENST00000636663 812 ntBASIC18.65■□□□□ 0.58
PRRX1P54821 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRRX1P54821 AC004812.2-201ENST00000611079 2094 ntBASIC18.65■□□□□ 0.58
PRRX1P54821 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRRX1P54821 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRRX1P54821 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PRRX1P54821 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.64■□□□□ 0.57
PRRX1P54821 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.64■□□□□ 0.57
PRRX1P54821 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRRX1P54821 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRRX1P54821 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRRX1P54821 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRRX1P54821 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.64■□□□□ 0.57
PRRX1P54821 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.64■□□□□ 0.57
PRRX1P54821 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PRRX1P54821 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PRRX1P54821 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PRRX1P54821 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRRX1P54821 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRRX1P54821 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
PRRX1P54821 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.63■□□□□ 0.57
PRRX1P54821 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PRRX1P54821 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRRX1P54821 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.63■□□□□ 0.57
PRRX1P54821 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.63■□□□□ 0.57
PRRX1P54821 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRRX1P54821 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.63■□□□□ 0.57
PRRX1P54821 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRRX1P54821 ALDH1A3-203ENST00000557963 1670 ntBASIC18.63■□□□□ 0.57
PRRX1P54821 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.62■□□□□ 0.57
PRRX1P54821 MIR6722-201ENST00000617286 78 ntBASIC18.62■□□□□ 0.57
PRRX1P54821 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.62■□□□□ 0.57
PRRX1P54821 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRRX1P54821 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRRX1P54821 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.61■□□□□ 0.57
PRRX1P54821 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PRRX1P54821 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 MTDHP2-201ENST00000601468 714 ntBASIC18.61■□□□□ 0.57
PRRX1P54821 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.61■□□□□ 0.57
PRRX1P54821 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRRX1P54821 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PRRX1P54821 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.6■□□□□ 0.57
PRRX1P54821 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.6■□□□□ 0.57
PRRX1P54821 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.6■□□□□ 0.57
PRRX1P54821 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRRX1P54821 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRRX1P54821 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRRX1P54821 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRRX1P54821 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRRX1P54821 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRRX1P54821 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms