Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SPC97YHR172W 2472 nt5.36□□□□□ -1.55
RPT4P53549 FOX2YKR009C 2703 nt5.36□□□□□ -1.55
RPT4P53549 UPS3YDR185C 540 nt5.36□□□□□ -1.55
RPT4P53549 RTT103YDR289C 1230 nt5.36□□□□□ -1.55
RPT4P53549 YGL088WYGL088W 366 nt5.36□□□□□ -1.55
RPT4P53549 SUT1YGL162W 900 nt5.36□□□□□ -1.55
RPT4P53549 DCD1YHR144C 939 nt5.36□□□□□ -1.55
RPT4P53549 UBX7YBR273C 1311 nt5.36□□□□□ -1.55
RPT4P53549 RTC5YOR118W 1704 nt5.36□□□□□ -1.55
RPT4P53549 YIR007WYIR007W 2295 nt5.35□□□□□ -1.55
RPT4P53549 IMD3YLR432W 1572 nt5.35□□□□□ -1.55
RPT4P53549 RTC1YOL138C 4026 nt5.35□□□□□ -1.55
RPT4P53549 KRE28YDR532C 1158 nt5.35□□□□□ -1.55
RPT4P53549 UBC8YEL012W 657 nt5.35□□□□□ -1.55
RPT4P53549 YHR214WYHR214W 612 nt5.35□□□□□ -1.55
RPT4P53549 YAR066WYAR066W 612 nt5.35□□□□□ -1.55
RPT4P53549 HEM15YOR176W 1182 nt5.35□□□□□ -1.55
RPT4P53549 RIM15YFL033C 5313 nt5.35□□□□□ -1.55
RPT4P53549 RPL28YGL103W 450 nt5.34□□□□□ -1.55
RPT4P53549 ISY1YJR050W 708 nt5.34□□□□□ -1.55
RPT4P53549 SPG4YMR107W 348 nt5.34□□□□□ -1.55
RPT4P53549 FHL1YPR104C 2811 nt5.34□□□□□ -1.55
RPT4P53549 SSB2YNL209W 1842 nt5.34□□□□□ -1.55
RPT4P53549 DNF2YDR093W 4839 nt5.34□□□□□ -1.56
RPT4P53549 CAF4YKR036C 1932 nt5.33□□□□□ -1.56
RPT4P53549 HES1YOR237W 1305 nt5.33□□□□□ -1.56
RPT4P53549 RXT3YDL076C 885 nt5.33□□□□□ -1.56
RPT4P53549 MHF2YDL160C-A 243 nt5.33□□□□□ -1.56
RPT4P53549 RHO3YIL118W 696 nt5.33□□□□□ -1.56
RPT4P53549 RSA3YLR221C 663 nt5.33□□□□□ -1.56
RPT4P53549 MTF1YMR228W 1026 nt5.33□□□□□ -1.56
RPT4P53549 snR10snR10 245 nt5.33□□□□□ -1.56
RPT4P53549 RVB1YDR190C 1392 nt5.32□□□□□ -1.56
RPT4P53549 ELP2YGR200C 2367 nt5.32□□□□□ -1.56
RPT4P53549 YGR291CYGR291C 222 nt5.32□□□□□ -1.56
RPT4P53549 tS(AGA)D3tS(AGA)D3 83 nt5.32□□□□□ -1.56
RPT4P53549 YBR298C-AYBR298C-A 222 nt5.32□□□□□ -1.56
RPT4P53549 NMD3YHR170W 1557 nt5.32□□□□□ -1.56
RPT4P53549 MGS1YNL218W 1764 nt5.32□□□□□ -1.56
RPT4P53549 UGA1YGR019W 1416 nt5.31□□□□□ -1.56
RPT4P53549 ROG3YFR022W 2202 nt5.31□□□□□ -1.56
RPT4P53549 ASF2YDL197C 1578 nt5.31□□□□□ -1.56
RPT4P53549 GSP2YOR185C 663 nt5.31□□□□□ -1.56
RPT4P53549 KGD1YIL125W 3045 nt5.31□□□□□ -1.56
RPT4P53549 UBX2YML013W 1755 nt5.3□□□□□ -1.56
RPT4P53549 SAP4YGL229C 2457 nt5.3□□□□□ -1.56
RPT4P53549 MET12YPL023C 1974 nt5.3□□□□□ -1.56
RPT4P53549 PCT1YGR202C 1275 nt5.3□□□□□ -1.56
RPT4P53549 YKL107WYKL107W 930 nt5.3□□□□□ -1.56
RPT4P53549 RRT7YLL030C 342 nt5.3□□□□□ -1.56
RPT4P53549 PML1YLR016C 615 nt5.3□□□□□ -1.56
RPT4P53549 PHA2YNL316C 1005 nt5.3□□□□□ -1.56
RPT4P53549 YOR379CYOR379C 339 nt5.3□□□□□ -1.56
RPT4P53549 NRD1YNL251C 1728 nt5.3□□□□□ -1.56
RPT4P53549 YIL092WYIL092W 1902 nt5.3□□□□□ -1.56
RPT4P53549 SNA2YDR525W-A 240 nt5.29□□□□□ -1.56
RPT4P53549 RPL12AYEL054C 498 nt5.29□□□□□ -1.56
RPT4P53549 YER145C-AYER145C-A 438 nt5.29□□□□□ -1.56
RPT4P53549 PDE1YGL248W 1110 nt5.29□□□□□ -1.56
RPT4P53549 YIL165CYIL165C 360 nt5.29□□□□□ -1.56
RPT4P53549 MRPL20YKR085C 588 nt5.29□□□□□ -1.56
RPT4P53549 YPR109WYPR109W 885 nt5.29□□□□□ -1.56
RPT4P53549 VTC2YFL004W 2487 nt5.29□□□□□ -1.56
RPT4P53549 FRA2YGL220W 363 nt5.28□□□□□ -1.56
RPT4P53549 COA3YJL062W-A 258 nt5.28□□□□□ -1.56
RPT4P53549 RER1YCL001W 567 nt5.28□□□□□ -1.56
RPT4P53549 FRS1YLR060W 1788 nt5.28□□□□□ -1.56
RPT4P53549 MNN2YBR015C 1794 nt5.28□□□□□ -1.56
RPT4P53549 CTS2YDR371W 1536 nt5.28□□□□□ -1.56
RPT4P53549 GDH2YDL215C 3279 nt5.28□□□□□ -1.56
RPT4P53549 RCK2YLR248W 1833 nt5.27□□□□□ -1.57
RPT4P53549 ARG82YDR173C 1068 nt5.27□□□□□ -1.57
RPT4P53549 HST4YDR191W 1113 nt5.27□□□□□ -1.57
RPT4P53549 ASP1YDR321W 1146 nt5.27□□□□□ -1.57
RPT4P53549 YKL023WYKL023W 834 nt5.27□□□□□ -1.57
RPT4P53549 MKK2YPL140C 1521 nt5.27□□□□□ -1.57
RPT4P53549 YMD8YML038C 1329 nt5.26□□□□□ -1.57
RPT4P53549 PMT2YAL023C 2280 nt5.26□□□□□ -1.57
RPT4P53549 RAM1YDL090C 1296 nt5.26□□□□□ -1.57
RPT4P53549 DPB4YDR121W 591 nt5.26□□□□□ -1.57
RPT4P53549 ADD37YMR184W 597 nt5.26□□□□□ -1.57
RPT4P53549 TIP41YPR040W 1071 nt5.26□□□□□ -1.57
RPT4P53549 RRB1YMR131C 1536 nt5.26□□□□□ -1.57
RPT4P53549 GSY1YFR015C 2127 nt5.26□□□□□ -1.57
RPT4P53549 CPR4YCR069W 957 nt5.25□□□□□ -1.57
RPT4P53549 YEL067CYEL067C 588 nt5.25□□□□□ -1.57
RPT4P53549 YIR043CYIR043C 693 nt5.25□□□□□ -1.57
RPT4P53549 CWC25YNL245C 540 nt5.25□□□□□ -1.57
RPT4P53549 DIT1YDR403W 1611 nt5.25□□□□□ -1.57
RPT4P53549 MMR1YLR190W 1476 nt5.25□□□□□ -1.57
RPT4P53549 DBP9YLR276C 1785 nt5.24□□□□□ -1.57
RPT4P53549 MAL11YGR289C 1851 nt5.24□□□□□ -1.57
RPT4P53549 AIM7YDR063W 450 nt5.24□□□□□ -1.57
RPT4P53549 YMR030W-AYMR030W-A 291 nt5.24□□□□□ -1.57
RPT4P53549 ENV9YOR246C 993 nt5.24□□□□□ -1.57
RPT4P53549 RAD53YPL153C 2466 nt5.24□□□□□ -1.57
RPT4P53549 APE1YKL103C 1545 nt5.23□□□□□ -1.57
RPT4P53549 VAN1YML115C 1608 nt5.23□□□□□ -1.57
RPT4P53549 AAD4YDL243C 990 nt5.23□□□□□ -1.57
RPT4P53549 YMR147WYMR147W 672 nt5.23□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms