Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
CPT1AP50416 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPT1AP50416 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CPT1AP50416 AC097381.1-201ENST00000429019 1296 ntBASIC25.51■■□□□ 1.67
CPT1AP50416 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CPT1AP50416 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CPT1AP50416 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CPT1AP50416 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.5■■□□□ 1.67
CPT1AP50416 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.5■■□□□ 1.67
CPT1AP50416 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.5■■□□□ 1.67
CPT1AP50416 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.5■■□□□ 1.67
CPT1AP50416 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPT1AP50416 AC009086.3-201ENST00000623486 1008 ntBASIC25.5■■□□□ 1.67
CPT1AP50416 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CPT1AP50416 IRS3P-201ENST00000223076 1006 ntBASIC25.49■■□□□ 1.67
CPT1AP50416 AC006455.2-201ENST00000429931 906 ntBASIC25.49■■□□□ 1.67
CPT1AP50416 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CPT1AP50416 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.49■■□□□ 1.67
CPT1AP50416 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPT1AP50416 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPT1AP50416 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPT1AP50416 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.48■■□□□ 1.67
CPT1AP50416 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPT1AP50416 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPT1AP50416 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.48■■□□□ 1.67
CPT1AP50416 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPT1AP50416 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.47■■□□□ 1.67
CPT1AP50416 MIR3181-201ENST00000578512 73 ntBASIC25.47■■□□□ 1.67
CPT1AP50416 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.47■■□□□ 1.67
CPT1AP50416 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPT1AP50416 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CPT1AP50416 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CPT1AP50416 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CPT1AP50416 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPT1AP50416 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.46■■□□□ 1.67
CPT1AP50416 AC233992.3-201ENST00000607491 485 ntBASIC25.46■■□□□ 1.67
CPT1AP50416 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
CPT1AP50416 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CPT1AP50416 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.46■■□□□ 1.67
CPT1AP50416 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPT1AP50416 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.46■■□□□ 1.67
CPT1AP50416 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPT1AP50416 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
CPT1AP50416 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.45■■□□□ 1.67
CPT1AP50416 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.45■■□□□ 1.67
CPT1AP50416 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.45■■□□□ 1.66
CPT1AP50416 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.45■■□□□ 1.66
CPT1AP50416 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPT1AP50416 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPT1AP50416 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPT1AP50416 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPT1AP50416 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.44■■□□□ 1.66
CPT1AP50416 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CPT1AP50416 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPT1AP50416 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CPT1AP50416 BX842568.3-201ENST00000418104 571 ntBASIC25.44■■□□□ 1.66
CPT1AP50416 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.44■■□□□ 1.66
CPT1AP50416 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.44■■□□□ 1.66
CPT1AP50416 HLA-L-211ENST00000482052 1765 ntBASIC25.44■■□□□ 1.66
CPT1AP50416 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.43■■□□□ 1.66
CPT1AP50416 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
CPT1AP50416 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPT1AP50416 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.43■■□□□ 1.66
CPT1AP50416 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPT1AP50416 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.43■■□□□ 1.66
CPT1AP50416 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.43■■□□□ 1.66
CPT1AP50416 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPT1AP50416 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CPT1AP50416 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CPT1AP50416 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.42■■□□□ 1.66
CPT1AP50416 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CPT1AP50416 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.42■■□□□ 1.66
CPT1AP50416 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CPT1AP50416 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CPT1AP50416 AC087623.3-201ENST00000607047 1098 ntBASIC25.42■■□□□ 1.66
CPT1AP50416 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.42■■□□□ 1.66
CPT1AP50416 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
CPT1AP50416 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CPT1AP50416 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.41■■□□□ 1.66
CPT1AP50416 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms