Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCL1P22362 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.68■□□□□ 0.74
CCL1P22362 PVT1_1.1-201ENST00000615125 194 ntBASIC19.68■□□□□ 0.74
CCL1P22362 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 AF131216.4-201ENST00000638924 1588 ntBASIC19.68■□□□□ 0.74
CCL1P22362 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCL1P22362 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL1P22362 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL1P22362 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.67■□□□□ 0.74
CCL1P22362 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL1P22362 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL1P22362 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCL1P22362 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.67■□□□□ 0.74
CCL1P22362 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL1P22362 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL1P22362 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL1P22362 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCL1P22362 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL1P22362 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCL1P22362 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL1P22362 MIR4281-201ENST00000580852 62 ntBASIC19.66■□□□□ 0.74
CCL1P22362 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 BHLHE23-202ENST00000612929 1109 ntBASIC19.66■□□□□ 0.74
CCL1P22362 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCL1P22362 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL1P22362 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCL1P22362 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCL1P22362 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
CCL1P22362 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.65■□□□□ 0.74
CCL1P22362 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL1P22362 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL1P22362 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCL1P22362 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL1P22362 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL1P22362 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.64■□□□□ 0.74
CCL1P22362 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL1P22362 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 TSPY13P-201ENST00000338964 914 ntBASIC19.64■□□□□ 0.73
CCL1P22362 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.64■□□□□ 0.73
CCL1P22362 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.64■□□□□ 0.73
CCL1P22362 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 THA1P-201ENST00000590384 1145 ntBASIC19.64■□□□□ 0.73
CCL1P22362 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.64■□□□□ 0.73
CCL1P22362 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL1P22362 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL1P22362 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCL1P22362 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL1P22362 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL1P22362 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL1P22362 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL1P22362 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL1P22362 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL1P22362 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL1P22362 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL1P22362 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL1P22362 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL1P22362 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL1P22362 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.62■□□□□ 0.73
CCL1P22362 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL1P22362 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.62■□□□□ 0.73
CCL1P22362 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 AC004448.1-201ENST00000458332 883 ntBASIC19.61■□□□□ 0.73
CCL1P22362 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.61■□□□□ 0.73
CCL1P22362 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCL1P22362 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL1P22362 AC079834.2-201ENST00000609776 1949 ntBASIC19.61■□□□□ 0.73
CCL1P22362 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL1P22362 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL1P22362 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.6■□□□□ 0.73
CCL1P22362 AC010980.1-201ENST00000587192 1142 ntBASIC19.6■□□□□ 0.73
CCL1P22362 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.6■□□□□ 0.73
CCL1P22362 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCL1P22362 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms