Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AC019069.1-201ENST00000610008 1333 ntBASIC20.3■□□□□ 0.84
PPP3CBP16298 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.3■□□□□ 0.84
PPP3CBP16298 AC138932.3-201ENST00000567634 1902 ntBASIC20.3■□□□□ 0.84
PPP3CBP16298 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.3■□□□□ 0.84
PPP3CBP16298 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.3■□□□□ 0.84
PPP3CBP16298 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.3■□□□□ 0.84
PPP3CBP16298 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.3■□□□□ 0.84
PPP3CBP16298 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.3■□□□□ 0.84
PPP3CBP16298 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.3■□□□□ 0.84
PPP3CBP16298 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PPP3CBP16298 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PPP3CBP16298 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP3CBP16298 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP3CBP16298 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP3CBP16298 AC131281.2-201ENST00000520478 145 ntBASIC20.29■□□□□ 0.84
PPP3CBP16298 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP3CBP16298 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PPP3CBP16298 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP3CBP16298 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPP3CBP16298 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPP3CBP16298 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
PPP3CBP16298 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP3CBP16298 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP3CBP16298 AC022211.4-201ENST00000625094 2161 ntBASIC20.28■□□□□ 0.84
PPP3CBP16298 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP3CBP16298 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP3CBP16298 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP3CBP16298 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CBP16298 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PPP3CBP16298 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CBP16298 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.27■□□□□ 0.84
PPP3CBP16298 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CBP16298 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP3CBP16298 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PPP3CBP16298 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP3CBP16298 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CBP16298 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CBP16298 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CBP16298 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CBP16298 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CBP16298 AL136116.3-201ENST00000402907 1138 ntBASIC20.25■□□□□ 0.83
PPP3CBP16298 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PPP3CBP16298 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.25■□□□□ 0.83
PPP3CBP16298 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP3CBP16298 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP3CBP16298 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
PPP3CBP16298 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP3CBP16298 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP3CBP16298 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CBP16298 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP3CBP16298 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP3CBP16298 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP3CBP16298 AC004448.1-201ENST00000458332 883 ntBASIC20.23■□□□□ 0.83
PPP3CBP16298 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PPP3CBP16298 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP3CBP16298 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP3CBP16298 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
PPP3CBP16298 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP3CBP16298 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP3CBP16298 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.22■□□□□ 0.83
PPP3CBP16298 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.22■□□□□ 0.83
PPP3CBP16298 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PPP3CBP16298 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.22■□□□□ 0.83
PPP3CBP16298 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.22■□□□□ 0.83
PPP3CBP16298 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PPP3CBP16298 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPP3CBP16298 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP3CBP16298 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PPP3CBP16298 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.21■□□□□ 0.83
PPP3CBP16298 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PPP3CBP16298 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PPP3CBP16298 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP3CBP16298 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP3CBP16298 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms