Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
CFTRP13569 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
CFTRP13569 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC39.86■■■■□ 3.97
CFTRP13569 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC39.86■■■■□ 3.97
CFTRP13569 AL358852.1-201ENST00000623174 1268 ntBASIC39.86■■■■□ 3.97
CFTRP13569 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC39.86■■■■□ 3.97
CFTRP13569 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC39.86■■■■□ 3.97
CFTRP13569 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
CFTRP13569 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
CFTRP13569 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
CFTRP13569 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
CFTRP13569 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC39.84■■■■□ 3.97
CFTRP13569 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC39.84■■■■□ 3.97
CFTRP13569 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC39.83■■■■□ 3.97
CFTRP13569 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC39.83■■■■□ 3.97
CFTRP13569 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC39.83■■■■□ 3.97
CFTRP13569 MIR6089-201ENST00000616698 64 ntBASIC39.83■■■■□ 3.97
CFTRP13569 GTSE1-AS1-202ENST00000623117 1518 ntBASIC39.83■■■■□ 3.97
CFTRP13569 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
CFTRP13569 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC39.82■■■■□ 3.97
CFTRP13569 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC39.82■■■■□ 3.97
CFTRP13569 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
CFTRP13569 AC012414.1-201ENST00000556676 535 ntBASIC39.81■■■■□ 3.96
CFTRP13569 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC39.81■■■■□ 3.96
CFTRP13569 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC39.81■■■■□ 3.96
CFTRP13569 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CFTRP13569 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CFTRP13569 NME4-202ENST00000382940 766 ntTSL 3 BASIC39.81■■■■□ 3.96
CFTRP13569 NME4-211ENST00000620944 1193 ntTSL 2 BASIC39.81■■■■□ 3.96
CFTRP13569 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC39.8■■■■□ 3.96
CFTRP13569 CCDC92B-201ENST00000575506 885 ntBASIC39.8■■■■□ 3.96
CFTRP13569 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC39.8■■■■□ 3.96
CFTRP13569 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC39.8■■■■□ 3.96
CFTRP13569 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CFTRP13569 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CFTRP13569 IGHV3-19-201ENST00000521488 291 ntBASIC39.79■■■■□ 3.96
CFTRP13569 NKILA-201ENST00000613231 537 ntTSL 4 BASIC39.79■■■■□ 3.96
CFTRP13569 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC39.79■■■■□ 3.96
CFTRP13569 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC39.78■■■■□ 3.96
CFTRP13569 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC39.78■■■■□ 3.96
CFTRP13569 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
CFTRP13569 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC39.78■■■■□ 3.96
CFTRP13569 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC39.78■■■■□ 3.96
CFTRP13569 AICDA-202ENST00000537228 667 ntTSL 5 BASIC39.78■■■■□ 3.96
CFTRP13569 AC126544.1-201ENST00000580842 1059 ntBASIC39.78■■■■□ 3.96
CFTRP13569 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC39.78■■■■□ 3.96
CFTRP13569 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC39.78■■■■□ 3.96
CFTRP13569 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
CFTRP13569 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
CFTRP13569 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC39.77■■■■□ 3.96
CFTRP13569 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC39.77■■■■□ 3.96
CFTRP13569 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC39.77■■■■□ 3.96
CFTRP13569 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
CFTRP13569 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC39.77■■■■□ 3.96
CFTRP13569 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC39.77■■■■□ 3.96
CFTRP13569 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC39.76■■■■□ 3.96
CFTRP13569 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC39.75■■■■□ 3.95
CFTRP13569 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC39.75■■■■□ 3.95
CFTRP13569 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC39.75■■■■□ 3.95
CFTRP13569 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC39.75■■■■□ 3.95
CFTRP13569 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC39.75■■■■□ 3.95
CFTRP13569 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC39.75■■■■□ 3.95
CFTRP13569 MIR572-201ENST00000384983 95 ntBASIC39.75■■■■□ 3.95
CFTRP13569 TERF1P2-201ENST00000583350 1212 ntBASIC39.75■■■■□ 3.95
CFTRP13569 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC39.74■■■■□ 3.95
CFTRP13569 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC39.74■■■■□ 3.95
CFTRP13569 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
CFTRP13569 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC39.74■■■■□ 3.95
CFTRP13569 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC39.74■■■■□ 3.95
CFTRP13569 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC39.73■■■■□ 3.95
CFTRP13569 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
CFTRP13569 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
CFTRP13569 MIR6084-201ENST00000622012 110 ntBASIC39.73■■■■□ 3.95
CFTRP13569 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
CFTRP13569 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
CFTRP13569 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC39.72■■■■□ 3.95
CFTRP13569 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
CFTRP13569 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
CFTRP13569 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC39.72■■■■□ 3.95
CFTRP13569 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC39.72■■■■□ 3.95
CFTRP13569 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC39.72■■■■□ 3.95
CFTRP13569 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC39.72■■■■□ 3.95
CFTRP13569 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC39.72■■■■□ 3.95
CFTRP13569 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC39.72■■■■□ 3.95
CFTRP13569 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC39.71■■■■□ 3.95
CFTRP13569 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC39.71■■■■□ 3.95
CFTRP13569 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC39.71■■■■□ 3.95
CFTRP13569 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
CFTRP13569 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
CFTRP13569 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
CFTRP13569 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC39.7■■■■□ 3.95
CFTRP13569 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
CFTRP13569 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
CFTRP13569 AL022069.1-201ENST00000568025 1636 ntBASIC39.7■■■■□ 3.95
CFTRP13569 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC39.69■■■■□ 3.94
CFTRP13569 pRNA.6-201ENST00000610482 90 ntBASIC39.69■■■■□ 3.94
CFTRP13569 pRNA.5-201ENST00000612139 90 ntBASIC39.69■■■■□ 3.94
CFTRP13569 pRNA.11-201ENST00000618423 90 ntBASIC39.69■■■■□ 3.94
CFTRP13569 pRNA.13-201ENST00000619112 90 ntBASIC39.69■■■■□ 3.94
CFTRP13569 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC39.69■■■■□ 3.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms