Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
CCL4P13236 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.7■■□□□ 1.06
CCL4P13236 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL4P13236 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL4P13236 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCL4P13236 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL4P13236 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.7■■□□□ 1.06
CCL4P13236 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.7■■□□□ 1.06
CCL4P13236 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.7■■□□□ 1.06
CCL4P13236 AC241377.3-202ENST00000626088 1088 ntBASIC21.7■■□□□ 1.06
CCL4P13236 AC241585.3-202ENST00000628937 1088 ntBASIC21.7■■□□□ 1.06
CCL4P13236 AC245100.8-202ENST00000629247 1058 ntBASIC21.7■■□□□ 1.06
CCL4P13236 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
CCL4P13236 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCL4P13236 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CCL4P13236 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL4P13236 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL4P13236 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCL4P13236 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCL4P13236 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CCL4P13236 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCL4P13236 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCL4P13236 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.69■■□□□ 1.06
CCL4P13236 AC099791.1-201ENST00000416440 715 ntBASIC21.69■■□□□ 1.06
CCL4P13236 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.69■■□□□ 1.06
CCL4P13236 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.69■■□□□ 1.06
CCL4P13236 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCL4P13236 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCL4P13236 HLA-L-211ENST00000482052 1765 ntBASIC21.69■■□□□ 1.06
CCL4P13236 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCL4P13236 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCL4P13236 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.68■■□□□ 1.06
CCL4P13236 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL4P13236 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.68■■□□□ 1.06
CCL4P13236 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCL4P13236 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCL4P13236 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CCL4P13236 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL4P13236 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.68■■□□□ 1.06
CCL4P13236 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCL4P13236 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL4P13236 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
CCL4P13236 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.67■■□□□ 1.06
CCL4P13236 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL4P13236 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.67■■□□□ 1.06
CCL4P13236 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL4P13236 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL4P13236 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCL4P13236 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.67■■□□□ 1.06
CCL4P13236 AC104564.3-201ENST00000582367 638 ntBASIC21.67■■□□□ 1.06
CCL4P13236 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.67■■□□□ 1.06
CCL4P13236 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
CCL4P13236 MIR6821-201ENST00000617625 74 ntBASIC21.67■■□□□ 1.06
CCL4P13236 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL4P13236 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL4P13236 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL4P13236 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCL4P13236 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCL4P13236 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCL4P13236 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL4P13236 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL4P13236 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.66■■□□□ 1.06
CCL4P13236 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.66■■□□□ 1.06
CCL4P13236 AC009086.3-201ENST00000623486 1008 ntBASIC21.66■■□□□ 1.06
CCL4P13236 AC136469.2-201ENST00000623944 1028 ntBASIC21.66■■□□□ 1.06
CCL4P13236 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL4P13236 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCL4P13236 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCL4P13236 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.65■■□□□ 1.06
CCL4P13236 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL4P13236 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL4P13236 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL4P13236 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL4P13236 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.65■■□□□ 1.06
CCL4P13236 AC097381.1-201ENST00000429019 1296 ntBASIC21.65■■□□□ 1.06
CCL4P13236 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCL4P13236 MIR3181-201ENST00000578512 73 ntBASIC21.65■■□□□ 1.06
CCL4P13236 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.65■■□□□ 1.06
CCL4P13236 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.65■■□□□ 1.06
CCL4P13236 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL4P13236 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCL4P13236 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL4P13236 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.64■■□□□ 1.05
CCL4P13236 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.64■■□□□ 1.05
CCL4P13236 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.64■■□□□ 1.05
CCL4P13236 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.64■■□□□ 1.05
CCL4P13236 AC087623.3-201ENST00000607047 1098 ntBASIC21.64■■□□□ 1.05
CCL4P13236 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCL4P13236 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL4P13236 IRS3P-201ENST00000223076 1006 ntBASIC21.63■■□□□ 1.05
CCL4P13236 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCL4P13236 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.63■■□□□ 1.05
CCL4P13236 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.63■■□□□ 1.05
CCL4P13236 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms