Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 C11orf96-202ENST00000528572 1834 ntBASIC20.96■□□□□ 0.95
SMIM18P0DKX4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.95■□□□□ 0.94
SMIM18P0DKX4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMIM18P0DKX4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM18P0DKX4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM18P0DKX4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SMIM18P0DKX4 AC139530.1-201ENST00000575312 1977 ntBASIC20.93■□□□□ 0.94
SMIM18P0DKX4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.93■□□□□ 0.94
SMIM18P0DKX4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.92■□□□□ 0.94
SMIM18P0DKX4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM18P0DKX4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SMIM18P0DKX4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SMIM18P0DKX4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SMIM18P0DKX4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM18P0DKX4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM18P0DKX4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMIM18P0DKX4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM18P0DKX4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM18P0DKX4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM18P0DKX4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM18P0DKX4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM18P0DKX4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 AC092053.2-201ENST00000640557 1818 ntBASIC20.86■□□□□ 0.93
SMIM18P0DKX4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM18P0DKX4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms