Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CAPN1P07384 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CAPN1P07384 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.33■■□□□ 1.17
CAPN1P07384 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.33■■□□□ 1.17
CAPN1P07384 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.33■■□□□ 1.17
CAPN1P07384 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.33■■□□□ 1.17
CAPN1P07384 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CAPN1P07384 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
CAPN1P07384 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.33■■□□□ 1.16
CAPN1P07384 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CAPN1P07384 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CAPN1P07384 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CAPN1P07384 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.33■■□□□ 1.16
CAPN1P07384 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN1P07384 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN1P07384 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN1P07384 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN1P07384 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CAPN1P07384 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CAPN1P07384 MIR4281-201ENST00000580852 62 ntBASIC22.32■■□□□ 1.16
CAPN1P07384 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN1P07384 AC021242.3-201ENST00000607598 1377 ntBASIC22.32■■□□□ 1.16
CAPN1P07384 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CAPN1P07384 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
CAPN1P07384 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
CAPN1P07384 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
CAPN1P07384 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.31■■□□□ 1.16
CAPN1P07384 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 UNC93B8-201ENST00000511903 705 ntBASIC22.31■■□□□ 1.16
CAPN1P07384 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.31■■□□□ 1.16
CAPN1P07384 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CAPN1P07384 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN1P07384 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN1P07384 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN1P07384 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN1P07384 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN1P07384 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN1P07384 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.3■■□□□ 1.16
CAPN1P07384 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN1P07384 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN1P07384 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN1P07384 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN1P07384 DUSP8P5-201ENST00000422884 1815 ntBASIC22.29■■□□□ 1.16
CAPN1P07384 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN1P07384 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN1P07384 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN1P07384 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN1P07384 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN1P07384 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN1P07384 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN1P07384 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CAPN1P07384 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN1P07384 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN1P07384 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.28■■□□□ 1.16
CAPN1P07384 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN1P07384 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN1P07384 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.28■■□□□ 1.16
CAPN1P07384 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.28■■□□□ 1.16
CAPN1P07384 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN1P07384 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.28■■□□□ 1.16
CAPN1P07384 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.27■■□□□ 1.16
CAPN1P07384 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN1P07384 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
CAPN1P07384 AC133561.1-201ENST00000568600 2415 ntBASIC22.27■■□□□ 1.16
CAPN1P07384 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.27■■□□□ 1.15
CAPN1P07384 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CAPN1P07384 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CAPN1P07384 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.26■■□□□ 1.15
CAPN1P07384 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.26■■□□□ 1.15
CAPN1P07384 AC011551.1-201ENST00000614101 683 ntBASIC22.26■■□□□ 1.15
CAPN1P07384 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.26■■□□□ 1.15
CAPN1P07384 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.26■■□□□ 1.15
CAPN1P07384 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CAPN1P07384 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CAPN1P07384 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CAPN1P07384 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN1P07384 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN1P07384 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.25■■□□□ 1.15
CAPN1P07384 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.25■■□□□ 1.15
CAPN1P07384 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.25■■□□□ 1.15
CAPN1P07384 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN1P07384 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms