Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.04■■□□□ 1.6
CHRNA1P02708 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
CHRNA1P02708 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHRNA1P02708 AC006455.2-201ENST00000429931 906 ntBASIC25.04■■□□□ 1.6
CHRNA1P02708 AC092666.2-201ENST00000613287 246 ntBASIC25.04■■□□□ 1.6
CHRNA1P02708 AC241377.3-202ENST00000626088 1088 ntBASIC25.04■■□□□ 1.6
CHRNA1P02708 AC241585.3-202ENST00000628937 1088 ntBASIC25.04■■□□□ 1.6
CHRNA1P02708 AC245100.8-202ENST00000629247 1058 ntBASIC25.04■■□□□ 1.6
CHRNA1P02708 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHRNA1P02708 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CHRNA1P02708 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CHRNA1P02708 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.03■■□□□ 1.6
CHRNA1P02708 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHRNA1P02708 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.03■■□□□ 1.6
CHRNA1P02708 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.03■■□□□ 1.6
CHRNA1P02708 AC008764.7-201ENST00000593779 1081 ntBASIC25.03■■□□□ 1.6
CHRNA1P02708 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.03■■□□□ 1.6
CHRNA1P02708 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.03■■□□□ 1.6
CHRNA1P02708 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.03■■□□□ 1.6
CHRNA1P02708 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CHRNA1P02708 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHRNA1P02708 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHRNA1P02708 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHRNA1P02708 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CHRNA1P02708 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CHRNA1P02708 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CHRNA1P02708 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHRNA1P02708 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHRNA1P02708 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHRNA1P02708 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHRNA1P02708 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.02■■□□□ 1.6
CHRNA1P02708 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHRNA1P02708 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.02■■□□□ 1.6
CHRNA1P02708 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHRNA1P02708 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CHRNA1P02708 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CHRNA1P02708 AC027682.1-201ENST00000562846 899 ntBASIC25.01■■□□□ 1.59
CHRNA1P02708 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.01■■□□□ 1.59
CHRNA1P02708 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHRNA1P02708 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.01■■□□□ 1.59
CHRNA1P02708 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25■■□□□ 1.59
CHRNA1P02708 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25■■□□□ 1.59
CHRNA1P02708 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHRNA1P02708 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHRNA1P02708 MIR5787-201ENST00000611784 55 ntBASIC25■■□□□ 1.59
CHRNA1P02708 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHRNA1P02708 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25■■□□□ 1.59
CHRNA1P02708 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHRNA1P02708 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHRNA1P02708 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHRNA1P02708 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.99■■□□□ 1.59
CHRNA1P02708 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
CHRNA1P02708 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CHRNA1P02708 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.99■■□□□ 1.59
CHRNA1P02708 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.99■■□□□ 1.59
CHRNA1P02708 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.99■■□□□ 1.59
CHRNA1P02708 AC136469.2-201ENST00000623944 1028 ntBASIC24.99■■□□□ 1.59
CHRNA1P02708 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHRNA1P02708 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHRNA1P02708 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHRNA1P02708 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHRNA1P02708 AL161729.1-201ENST00000604104 1402 ntBASIC24.98■■□□□ 1.59
CHRNA1P02708 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.98■■□□□ 1.59
CHRNA1P02708 AC099791.1-201ENST00000416440 715 ntBASIC24.98■■□□□ 1.59
CHRNA1P02708 MIR3181-201ENST00000578512 73 ntBASIC24.98■■□□□ 1.59
CHRNA1P02708 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.98■■□□□ 1.59
CHRNA1P02708 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.98■■□□□ 1.59
CHRNA1P02708 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHRNA1P02708 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHRNA1P02708 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHRNA1P02708 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.97■■□□□ 1.59
CHRNA1P02708 MIR6821-201ENST00000617625 74 ntBASIC24.97■■□□□ 1.59
CHRNA1P02708 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHRNA1P02708 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHRNA1P02708 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.97■■□□□ 1.59
CHRNA1P02708 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.96■■□□□ 1.59
CHRNA1P02708 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.96■■□□□ 1.59
CHRNA1P02708 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.96■■□□□ 1.59
CHRNA1P02708 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.96■■□□□ 1.59
CHRNA1P02708 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHRNA1P02708 AC009086.3-201ENST00000623486 1008 ntBASIC24.96■■□□□ 1.59
CHRNA1P02708 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHRNA1P02708 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHRNA1P02708 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHRNA1P02708 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.95■■□□□ 1.58
CHRNA1P02708 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHRNA1P02708 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.95■■□□□ 1.58
CHRNA1P02708 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHRNA1P02708 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHRNA1P02708 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHRNA1P02708 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHRNA1P02708 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHRNA1P02708 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms