Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CPNE3O75131 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CPNE3O75131 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE3O75131 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.77■■□□□ 1.08
CPNE3O75131 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE3O75131 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE3O75131 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE3O75131 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CPNE3O75131 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE3O75131 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CPNE3O75131 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE3O75131 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE3O75131 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CPNE3O75131 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE3O75131 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE3O75131 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CPNE3O75131 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE3O75131 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE3O75131 AC005837.3-201ENST00000612163 286 ntBASIC21.75■■□□□ 1.07
CPNE3O75131 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CPNE3O75131 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE3O75131 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE3O75131 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE3O75131 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE3O75131 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CPNE3O75131 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE3O75131 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CPNE3O75131 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE3O75131 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CPNE3O75131 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.73■■□□□ 1.07
CPNE3O75131 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 AC106739.1-201ENST00000617035 715 ntBASIC21.73■■□□□ 1.07
CPNE3O75131 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPNE3O75131 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE3O75131 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE3O75131 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CPNE3O75131 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE3O75131 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CPNE3O75131 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE3O75131 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE3O75131 UNC93B3-201ENST00000308076 687 ntBASIC21.72■■□□□ 1.07
CPNE3O75131 MIR935-201ENST00000401179 91 ntBASIC21.72■■□□□ 1.07
CPNE3O75131 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE3O75131 PBX2P1-201ENST00000493219 1291 ntBASIC21.72■■□□□ 1.07
CPNE3O75131 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE3O75131 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE3O75131 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE3O75131 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.71■■□□□ 1.07
CPNE3O75131 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE3O75131 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE3O75131 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.71■■□□□ 1.07
CPNE3O75131 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.71■■□□□ 1.07
CPNE3O75131 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE3O75131 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.7■■□□□ 1.06
CPNE3O75131 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.7■■□□□ 1.06
CPNE3O75131 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CPNE3O75131 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE3O75131 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE3O75131 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE3O75131 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE3O75131 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE3O75131 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE3O75131 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE3O75131 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE3O75131 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE3O75131 AL136162.1-201ENST00000607711 1078 ntBASIC21.69■■□□□ 1.06
CPNE3O75131 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CPNE3O75131 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE3O75131 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE3O75131 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE3O75131 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE3O75131 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE3O75131 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.68■■□□□ 1.06
CPNE3O75131 DUX4L19-201ENST00000557448 1267 ntBASIC21.68■■□□□ 1.06
CPNE3O75131 AC092171.4-201ENST00000609130 632 ntBASIC21.68■■□□□ 1.06
CPNE3O75131 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE3O75131 AC135279.3-201ENST00000610945 1311 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms