Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
CHD1O14646 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC37.75■■■■□ 3.63
CHD1O14646 AC016769.1-201ENST00000409132 1010 ntBASIC37.75■■■■□ 3.63
CHD1O14646 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC37.75■■■■□ 3.63
CHD1O14646 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC37.75■■■■□ 3.63
CHD1O14646 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC37.75■■■■□ 3.63
CHD1O14646 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
CHD1O14646 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC37.75■■■■□ 3.63
CHD1O14646 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CHD1O14646 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
CHD1O14646 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CHD1O14646 AC026185.1-201ENST00000445748 174 ntBASIC37.75■■■■□ 3.63
CHD1O14646 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CHD1O14646 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC37.74■■■■□ 3.63
CHD1O14646 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CHD1O14646 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC37.74■■■■□ 3.63
CHD1O14646 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC37.74■■■■□ 3.63
CHD1O14646 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CHD1O14646 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC37.73■■■■□ 3.63
CHD1O14646 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC37.73■■■■□ 3.63
CHD1O14646 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
CHD1O14646 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
CHD1O14646 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC37.73■■■■□ 3.63
CHD1O14646 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
CHD1O14646 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
CHD1O14646 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC37.73■■■■□ 3.63
CHD1O14646 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC37.73■■■■□ 3.63
CHD1O14646 ABCB10P1-201ENST00000614297 2181 ntBASIC37.73■■■■□ 3.63
CHD1O14646 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC37.72■■■■□ 3.63
CHD1O14646 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC37.72■■■■□ 3.63
CHD1O14646 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC37.72■■■■□ 3.63
CHD1O14646 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC37.71■■■■□ 3.63
CHD1O14646 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC37.71■■■■□ 3.63
CHD1O14646 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
CHD1O14646 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC37.71■■■■□ 3.63
CHD1O14646 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
CHD1O14646 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC37.7■■■■□ 3.63
CHD1O14646 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
CHD1O14646 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC37.7■■■■□ 3.63
CHD1O14646 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
CHD1O14646 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
CHD1O14646 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC37.7■■■■□ 3.63
CHD1O14646 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CHD1O14646 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC37.69■■■■□ 3.62
CHD1O14646 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC37.69■■■■□ 3.62
CHD1O14646 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC37.69■■■■□ 3.62
CHD1O14646 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CHD1O14646 MAP2K4P1-201ENST00000438453 1195 ntBASIC37.69■■■■□ 3.62
CHD1O14646 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CHD1O14646 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC37.69■■■■□ 3.62
CHD1O14646 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CHD1O14646 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC37.68■■■■□ 3.62
CHD1O14646 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC37.68■■■■□ 3.62
CHD1O14646 CROCCP5-201ENST00000436658 830 ntBASIC37.68■■■■□ 3.62
CHD1O14646 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC37.68■■■■□ 3.62
CHD1O14646 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC37.68■■■■□ 3.62
CHD1O14646 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC37.68■■■■□ 3.62
CHD1O14646 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC37.68■■■■□ 3.62
CHD1O14646 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CHD1O14646 MIR663A-201ENST00000385250 93 ntBASIC37.67■■■■□ 3.62
CHD1O14646 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC37.67■■■■□ 3.62
CHD1O14646 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CHD1O14646 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CHD1O14646 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CHD1O14646 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
CHD1O14646 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC37.67■■■■□ 3.62
CHD1O14646 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC37.67■■■■□ 3.62
CHD1O14646 AL109923.1-201ENST00000618799 583 ntBASIC37.67■■■■□ 3.62
CHD1O14646 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC37.66■■■■□ 3.62
CHD1O14646 AC137761.2-201ENST00000561729 223 ntBASIC37.66■■■■□ 3.62
CHD1O14646 AC145350.3-201ENST00000569033 163 ntBASIC37.66■■■■□ 3.62
CHD1O14646 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC37.66■■■■□ 3.62
CHD1O14646 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC37.66■■■■□ 3.62
CHD1O14646 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CHD1O14646 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
CHD1O14646 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC37.65■■■■□ 3.62
CHD1O14646 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC37.65■■■■□ 3.62
CHD1O14646 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC37.65■■■■□ 3.62
CHD1O14646 VGF-203ENST00000611537 1622 ntTSL 5 BASIC37.65■■■■□ 3.62
CHD1O14646 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
CHD1O14646 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC37.64■■■■□ 3.62
CHD1O14646 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
CHD1O14646 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC37.64■■■■□ 3.62
CHD1O14646 GTSE1-AS1-202ENST00000623117 1518 ntBASIC37.64■■■■□ 3.62
CHD1O14646 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
CHD1O14646 NT5C3AP1-201ENST00000394500 1012 ntBASIC37.64■■■■□ 3.62
CHD1O14646 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC37.64■■■■□ 3.62
CHD1O14646 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
CHD1O14646 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
CHD1O14646 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC37.63■■■■□ 3.62
CHD1O14646 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC37.63■■■■□ 3.61
CHD1O14646 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC37.63■■■■□ 3.61
CHD1O14646 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC37.63■■■■□ 3.61
CHD1O14646 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC37.63■■■■□ 3.61
CHD1O14646 AC096887.2-201ENST00000623443 1957 ntBASIC37.62■■■■□ 3.61
CHD1O14646 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC37.62■■■■□ 3.61
CHD1O14646 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC37.62■■■■□ 3.61
CHD1O14646 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC37.62■■■■□ 3.61
CHD1O14646 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC37.61■■■■□ 3.61
CHD1O14646 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms