Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN4O14493 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
CLDN4O14493 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN4O14493 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN4O14493 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.46■■□□□ 1.03
CLDN4O14493 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLDN4O14493 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN4O14493 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN4O14493 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN4O14493 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.45■■□□□ 1.02
CLDN4O14493 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN4O14493 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN4O14493 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CLDN4O14493 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.44■■□□□ 1.02
CLDN4O14493 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN4O14493 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN4O14493 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN4O14493 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.44■■□□□ 1.02
CLDN4O14493 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN4O14493 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN4O14493 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLDN4O14493 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN4O14493 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.44■■□□□ 1.02
CLDN4O14493 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN4O14493 AL356740.2-201ENST00000601559 647 ntBASIC21.43■■□□□ 1.02
CLDN4O14493 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.43■■□□□ 1.02
CLDN4O14493 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.43■■□□□ 1.02
CLDN4O14493 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN4O14493 AC004812.2-201ENST00000611079 2094 ntBASIC21.43■■□□□ 1.02
CLDN4O14493 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN4O14493 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN4O14493 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.42■■□□□ 1.02
CLDN4O14493 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDN4O14493 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN4O14493 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
CLDN4O14493 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN4O14493 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.41■■□□□ 1.02
CLDN4O14493 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN4O14493 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.41■■□□□ 1.02
CLDN4O14493 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CLDN4O14493 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.4■■□□□ 1.02
CLDN4O14493 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN4O14493 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CLDN4O14493 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CLDN4O14493 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.39■■□□□ 1.01
CLDN4O14493 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN4O14493 AC131212.1-201ENST00000613771 668 ntBASIC21.39■■□□□ 1.01
CLDN4O14493 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN4O14493 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN4O14493 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN4O14493 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN4O14493 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.38■■□□□ 1.01
CLDN4O14493 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLDN4O14493 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.38■■□□□ 1.01
CLDN4O14493 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN4O14493 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.38■■□□□ 1.01
CLDN4O14493 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLDN4O14493 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN4O14493 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN4O14493 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN4O14493 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN4O14493 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.37■■□□□ 1.01
CLDN4O14493 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.37■■□□□ 1.01
CLDN4O14493 MIR3621-201ENST00000580529 85 ntBASIC21.37■■□□□ 1.01
CLDN4O14493 AL117332.1-201ENST00000622628 974 ntBASIC21.37■■□□□ 1.01
CLDN4O14493 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN4O14493 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN4O14493 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.37■■□□□ 1.01
CLDN4O14493 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN4O14493 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CLDN4O14493 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLDN4O14493 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.36■■□□□ 1.01
CLDN4O14493 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN4O14493 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms