Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTCAO00442 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTCAO00442 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTCAO00442 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.72■■□□□ 1.07
RTCAO00442 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 KRT125P-201ENST00000546827 989 ntBASIC21.72■■□□□ 1.07
RTCAO00442 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RTCAO00442 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTCAO00442 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTCAO00442 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.71■■□□□ 1.07
RTCAO00442 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.71■■□□□ 1.07
RTCAO00442 Z92544.1-202ENST00000571933 1220 ntBASIC21.71■■□□□ 1.07
RTCAO00442 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.71■■□□□ 1.07
RTCAO00442 MIR4787-201ENST00000607364 84 ntBASIC21.71■■□□□ 1.07
RTCAO00442 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.71■■□□□ 1.07
RTCAO00442 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTCAO00442 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTCAO00442 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTCAO00442 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
RTCAO00442 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.7■■□□□ 1.06
RTCAO00442 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.7■■□□□ 1.06
RTCAO00442 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCAO00442 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.7■■□□□ 1.06
RTCAO00442 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.7■■□□□ 1.06
RTCAO00442 AL035685.1-201ENST00000636663 812 ntBASIC21.7■■□□□ 1.06
RTCAO00442 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCAO00442 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCAO00442 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCAO00442 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCAO00442 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCAO00442 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTCAO00442 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTCAO00442 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.69■■□□□ 1.06
RTCAO00442 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
RTCAO00442 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RTCAO00442 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCAO00442 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
RTCAO00442 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
RTCAO00442 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCAO00442 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCAO00442 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.68■■□□□ 1.06
RTCAO00442 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.68■■□□□ 1.06
RTCAO00442 AC092028.1-203ENST00000608262 953 ntBASIC21.68■■□□□ 1.06
RTCAO00442 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTCAO00442 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCAO00442 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCAO00442 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCAO00442 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTCAO00442 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.67■■□□□ 1.06
RTCAO00442 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTCAO00442 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCAO00442 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTCAO00442 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTCAO00442 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.67■■□□□ 1.06
RTCAO00442 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCAO00442 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.67■■□□□ 1.06
RTCAO00442 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCAO00442 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCAO00442 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RTCAO00442 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.66■■□□□ 1.06
RTCAO00442 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RTCAO00442 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RTCAO00442 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RTCAO00442 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.66■■□□□ 1.06
RTCAO00442 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.66■■□□□ 1.06
RTCAO00442 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTCAO00442 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCAO00442 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTCAO00442 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCAO00442 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RTCAO00442 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.65■■□□□ 1.06
RTCAO00442 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCAO00442 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RTCAO00442 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.65■■□□□ 1.06
RTCAO00442 TSPY9P-201ENST00000440215 945 ntBASIC21.65■■□□□ 1.06
RTCAO00442 TSPY11P-201ENST00000442607 1045 ntBASIC21.65■■□□□ 1.06
RTCAO00442 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.65■■□□□ 1.06
RTCAO00442 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RTCAO00442 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.65■■□□□ 1.06
RTCAO00442 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCAO00442 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCAO00442 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.65■■□□□ 1.06
RTCAO00442 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms