Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MEIS3P1A6NDR6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MEIS3P1A6NDR6 LINC00526-201ENST00000581067 1875 ntBASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 AC016575.1-201ENST00000607026 382 ntBASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MEIS3P1A6NDR6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 RP9P-202ENST00000450133 1212 ntBASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 AC093536.1-201ENST00000569153 554 ntBASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 AC092068.2-201ENST00000590491 1708 ntBASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MEIS3P1A6NDR6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
MEIS3P1A6NDR6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.42■□□□□ 0.7
MEIS3P1A6NDR6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MEIS3P1A6NDR6 AC092296.2-201ENST00000589470 999 ntBASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 AC007375.3-201ENST00000600936 2314 ntBASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MEIS3P1A6NDR6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms