Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
TRIM43BA6NCK2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 AC027612.3-201ENST00000413684 1047 ntBASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 AC123595.1-201ENST00000440769 1046 ntBASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM43BA6NCK2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM43BA6NCK2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.15■■□□□ 1.62
TRIM43BA6NCK2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.15■■□□□ 1.62
TRIM43BA6NCK2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.15■■□□□ 1.62
TRIM43BA6NCK2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.15■■□□□ 1.62
TRIM43BA6NCK2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 MIR6084-201ENST00000622012 110 ntBASIC25.14■■□□□ 1.62
TRIM43BA6NCK2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TRIM43BA6NCK2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TRIM43BA6NCK2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 AL358852.1-201ENST00000623174 1268 ntBASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM43BA6NCK2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
TRIM43BA6NCK2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 HLA-L-209ENST00000420110 1011 ntBASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 CCDC92B-201ENST00000575506 885 ntBASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM43BA6NCK2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 NTF6G-201ENST00000591094 616 ntBASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 AC135731.1-201ENST00000569415 2548 ntBASIC25.1■■□□□ 1.61
TRIM43BA6NCK2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 AC142086.6-201ENST00000621154 1765 ntBASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 pRNA.6-201ENST00000610482 90 ntBASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 pRNA.5-201ENST00000612139 90 ntBASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 pRNA.11-201ENST00000618423 90 ntBASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 pRNA.13-201ENST00000619112 90 ntBASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM43BA6NCK2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.08■■□□□ 1.61
TRIM43BA6NCK2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms