Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 ANOS2P-203ENST00000472227 1816 ntBASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV21A0A0B4J279 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV21A0A0B4J279 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 AL022069.1-201ENST00000568025 1636 ntBASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV21A0A0B4J279 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 SPCS2P3-201ENST00000500401 656 ntBASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 C9orf163-202ENST00000624034 2573 ntBASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV21A0A0B4J279 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 AC092068.2-201ENST00000590491 1708 ntBASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV21A0A0B4J279 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV21A0A0B4J279 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 DUX4L9-201ENST00000449051 1259 ntBASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV21A0A0B4J279 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 AC011551.1-201ENST00000614101 683 ntBASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV21A0A0B4J279 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms