Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRAV38-1A0A0B4J264 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV38-1A0A0B4J264 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 AL356441.2-201ENST00000443009 864 ntBASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MIR6724-1-201ENST00000616420 92 ntBASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MIR6724-2-201ENST00000616483 92 ntBASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MIR6724-4-201ENST00000617390 92 ntBASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MIR6724-3-201ENST00000622482 92 ntBASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 AC005703.6-201ENST00000623265 1329 ntBASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV38-1A0A0B4J264 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.14■□□□□ 0.66
TRAV38-1A0A0B4J264 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV38-1A0A0B4J264 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 ALDH1A3-203ENST00000557963 1670 ntBASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV38-1A0A0B4J264 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV38-1A0A0B4J264 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV38-1A0A0B4J264 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV38-1A0A0B4J264 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms