Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 SUDS3P1-201ENST00000505831 966 ntBASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 C17orf82-201ENST00000623772 1530 ntBASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRAV19A0A0A6YYK7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV19A0A0A6YYK7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 SERBP1P1-201ENST00000396021 1160 ntBASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 AC241377.3-202ENST00000626088 1088 ntBASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 AC241585.3-202ENST00000628937 1088 ntBASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 AC245100.8-202ENST00000629247 1058 ntBASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 ALDH1A3-203ENST00000557963 1670 ntBASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV19A0A0A6YYK7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV19A0A0A6YYK7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.64■■□□□ 1.38
TRAV19A0A0A6YYK7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRAV19A0A0A6YYK7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.64■■□□□ 1.38
TRAV19A0A0A6YYK7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRAV19A0A0A6YYK7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 MIR4767-201ENST00000582827 78 ntBASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 AL138724.1-201ENST00000606771 1088 ntBASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRAV19A0A0A6YYK7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 ZNRF2P3-201ENST00000424200 374 ntBASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 AF213884.3-201ENST00000563833 479 ntBASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAV19A0A0A6YYK7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRAV19A0A0A6YYK7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 AP001330.3-201ENST00000520123 633 ntBASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 AC011298.3-201ENST00000615796 283 ntBASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 AL136967.2-201ENST00000623968 743 ntBASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 AC142381.3-201ENST00000568208 1670 ntBASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRAV19A0A0A6YYK7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAV19A0A0A6YYK7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAV19A0A0A6YYK7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms