Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-1A0A0A6YYK1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRAV8-1A0A0A6YYK1 AC092068.2-201ENST00000590491 1708 ntBASIC17.27■□□□□ 0.35
TRAV8-1A0A0A6YYK1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-1A0A0A6YYK1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-1A0A0A6YYK1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-1A0A0A6YYK1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-1A0A0A6YYK1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV8-1A0A0A6YYK1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-1A0A0A6YYK1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-1A0A0A6YYK1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-1A0A0A6YYK1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-1A0A0A6YYK1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 MIR639-201ENST00000384974 98 ntBASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 MIR7108-201ENST00000614319 87 ntBASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-1A0A0A6YYK1 AC090877.2-201ENST00000558441 1738 ntBASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-1A0A0A6YYK1 GUSBP5-202ENST00000510805 1989 ntBASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms