Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 KLF2P1-201ENST00000447438 1042 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 TPT1P11-201ENST00000458482 498 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 AC108725.1-201ENST00000495472 409 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 AC092658.1-201ENST00000505836 891 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 MIR4538-201ENST00000581377 78 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 AL162426.1-201ENST00000624141 743 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 KRT8P28-201ENST00000433288 1390 ntBASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 PFN1P12-201ENST00000455938 534 ntBASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC021723.1-201ENST00000486306 515 ntBASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 FAM8A2P-201ENST00000528813 1142 ntBASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC215219.1-201ENST00000400706 1817 ntBASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 AC023908.3-201ENST00000564211 3047 ntBASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGC4Q9Y5F7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms