Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 AC079781.5-202ENST00000641784 3743 ntBASIC16.71■□□□□ 0.27
PCDHA7Q9UN72 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
PCDHA7Q9UN72 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHA7Q9UN72 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDHA7Q9UN72 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDHA7Q9UN72 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHA7Q9UN72 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 KRT8P28-201ENST00000433288 1390 ntBASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AC025279.2-201ENST00000569730 653 ntBASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ECM1P1-201ENST00000604092 1279 ntBASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AC132938.4-201ENST00000623835 848 ntBASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AGAP10P-201ENST00000454844 2418 ntBASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 AC097376.2-205ENST00000610159 5334 ntBASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHA7Q9UN72 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 TPM3P8-201ENST00000330554 643 ntBASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHA7Q9UN72 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHA7Q9UN72 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms