Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.46■□□□□ 0.7
NPC1L1Q9UHC9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 AL353637.1-201ENST00000451571 732 ntBASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 RN7SL530P-201ENST00000485097 298 ntBASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 AL353770.1-201ENST00000614915 403 ntBASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 RPL13AP3-202ENST00000494676 1473 ntBASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPC1L1Q9UHC9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 OR8T1P-201ENST00000421347 918 ntBASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 AC026748.1-201ENST00000624349 3251 ntBASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 NUP210P1-202ENST00000504322 710 ntBASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.44■□□□□ 0.7
NPC1L1Q9UHC9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms