Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC009093.2-202ENST00000620513 2079 ntBASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
VPS29Q9UBQ0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 AL590440.2-201ENST00000641973 1595 ntBASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 AL359881.3-201ENST00000602640 1721 ntBASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS29Q9UBQ0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 TCAM1P-207ENST00000485295 1537 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 BEND3P1-201ENST00000421591 1944 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 AC005840.4-201ENST00000541242 2494 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CD8B2-202ENST00000417670 633 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 FAM8A4P-201ENST00000435433 1213 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 INE1-201ENST00000456273 945 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 RN7SL692P-201ENST00000464677 288 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 USP32P1-208ENST00000506594 1164 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 SORD2P-201ENST00000558556 1069 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms